Pairwise Alignments

Query, 1236 a.a., AcrB/AcrD/AcrF family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1041 a.a., efflux RND transporter permease subunit from Dyella japonica UNC79MFTsu3.2

 Score =  364 bits (934), Expect = e-104
 Identities = 272/954 (28%), Positives = 455/954 (47%), Gaps = 35/954 (3%)

Query: 279  HTEPGLVVLDVSTRHDAAALSARLAVFRA-ERVGANA--LHPDLWEPAVFASGDDARAAL 335
            +T PGL    ++        + +   ++A +++G     L P +  P V     D   AL
Sbjct: 88   YTRPGLAFTTLTLLDSTPPSAVQEEFYQARKKIGDETGNLPPGVIGPLVNDEYADVTFAL 147

Query: 336  EAVAADRYSWRDLEAYTEKVRATLERLGSVGKVSRWGVRPETIFIDWSQERLASLGLDPQ 395
             A+ A     R L    E +R  L  +  V KV+  G + E I++++S +RLA+LG+ PQ
Sbjct: 148  FALKAKGEPQRLLVRDAEGLRQRLLHVPGVKKVNIIGEQAEKIYVEFSHDRLATLGVSPQ 207

Query: 396  QVAQTLAARNTSLPGGQLETRGRGVLLDSEGELRSATDLAEVMVATSASGAPLYLRDVAD 455
             V   L ++N   P G +ET+G  V +  +G   S   + +  V   A G  L L D+A 
Sbjct: 208  DVFAALNSQNALTPAGSVETKGPEVFIRLDGAFDSLQKIRDTPVV--AHGRTLKLSDIAT 265

Query: 456  VTRSYRAPVENLNHFVHRDADGTWRRGKAITLAVEMRSGEHIDAFSREVDAALGDLTQRL 515
            V R Y  P      F+ R+         A+ L + MR G +     + +D+ +G +   L
Sbjct: 266  VKRGYEDPAT----FMIRN-----NGEPALLLGIVMRDGWNGLDLGKALDSEVGAINGGL 316

Query: 516  PEDLLVVRTSDQPRQVTEKVDLFTLSLEEAVVLVVAVAFIGFREWRSALLMALSIPLTLA 575
            P  + + + +DQ   ++  VD F L    A+++V+ V F+    WR  L++A ++PLTLA
Sbjct: 317  PLGMSLTKVTDQAVNISSAVDEFMLKFFVALLVVMVVCFVSMG-WRVGLVVAAAVPLTLA 375

Query: 576  MTFGMMHLLGIDLQQISIASLILALGLLVDDPVVAGDAIKREIAEGRPRRLAAWLGPTKL 635
            + F +M   G +  +I++ SLILALGLLVDD ++A + +  ++ EG  R  A+    +  
Sbjct: 376  VVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYSRVAASAYAWSHT 435

Query: 636  ARAILYATITNIVAYLPFLLLTGDKGRFLYSMPIVVACSLVASRIVSMTFIPLLGSVLLD 695
            A  +L  T+   V ++P        G +  +M  +V  +LVAS +V++ F P LG  +L 
Sbjct: 436  AAPMLAGTLVTAVGFMPNGFARSTAGEYTSNMFWIVGIALVASWVVAVVFTPYLGVKMLP 495

Query: 696  AGRR-EGTVEERRARGLGRLYYAVGGWAIDHRWKVLAGSLLLVVAGFWLQGQLKPQFFPK 754
              ++ EG  E          +  + G  I  +W V    + L V        +K QFFP 
Sbjct: 496  QFKKVEGGHEAIYDTPRYNRFRQLLGRVIARKWLVAGSVVGLFVLAILGMALVKKQFFPI 555

Query: 755  DRSYLSYVDLWLPEDATVEATARVAADAARIVTDRVAAFDAETGRAAKGLPPALRSVTVF 814
                   V++ +P   ++E T+ VAA        +V  + A    A        + VT +
Sbjct: 556  SDRPEVLVEVQMPYGTSIEQTSAVAA--------KVETWLARQQEA--------KIVTAY 599

Query: 815  TGGGGPRFWFSVTPELRQPNYAQLLVEVSDNHLTKELIGPLQQALSERLPS-ARADVMEL 873
             G G PRF+ ++ PEL  P++A++++   +    + L   L++A+++ L + AR  V +L
Sbjct: 600  IGQGAPRFYLAMGPELPDPSFAKIVIRTDNQEEREVLKQRLRKAIADGLGAEARVRVTQL 659

Query: 874  ENGPPIGVPVQLRLYGDDIPALRAESERLKAILRADPDATRVKDNWGADTFVARLRVDPD 933
              GP    PV  R+ G D   LR  +  ++ ++ A P    V  +WG  T      +  D
Sbjct: 660  VFGPYSPYPVAFRISGPDPDKLRGIATEVEQVMDASPMMRTVNADWGTRTPTLHFSLQQD 719

Query: 934  KAALSGVTMLDVARATGNAATGTTVTALREGRLTVPVVSRLRPDERADATDVEGLYVAGQ 993
            +    G++   VA+      +G  V+A+RE   TV VV+R     R D   +    +AG 
Sbjct: 720  RLQAVGLSSSAVAQQLQFLLSGIPVSAVREDIRTVQVVARAAGGVRLDPARIGDFTLAGA 779

Query: 994  GGTRVPLAQIAEPEYGMETARIFRRNQQRCVVISCFPREGVLPSEVVARAMPAIGRFRAD 1053
             G R+PL+Q+ + +  ME   + RR++   + +     E + P +V       +    A 
Sbjct: 780  NGQRIPLSQVGQVDVRMEEPVMRRRDRAPTITVRGDIAENLQPPDVSTAMAKQLQPLIAK 839

Query: 1054 LPPGFRLEFGGEHEEQVKGFKELAGVMGISIAMIYMALLFQFRNAVKPLIVFAAIPYGMT 1113
            LP G+R+E  G  EE  K  K +  +  I +A   + ++FQ R+    ++VF   P G+ 
Sbjct: 840  LPGGYRIEEAGSIEESGKATKAMLPLFPIMLAATLLIIIFQVRSISAMVMVFLTSPLGLI 899

Query: 1114 GAFAALRLMGQPFGFMAFLGIASLIGVIVSHIIVLFDFIEEKREEGEDLRTALLDAGIVR 1173
            G    L L GQPFG  A +G+ +L G+++ + ++L   I      G D   A+++A + R
Sbjct: 900  GVVPTLILFGQPFGINALVGLIALSGILMRNTLILIGQIHHNEAAGLDPFHAVVEATVQR 959

Query: 1174 LRPVMITVAATVIALFPLALHGGALWEPLCYAQAGGLTVATFVTLLMVPVLYAI 1227
             RPV++T  A ++A  PL       W  L Y   GG    T +TL+ +P +Y+I
Sbjct: 960  ARPVILTALAAILAFIPLT--HSVFWGTLAYTLIGGTFAGTVLTLVFLPAMYSI 1011



 Score = 60.8 bits (146), Expect = 6e-13
 Identities = 35/129 (27%), Positives = 67/129 (51%), Gaps = 4/129 (3%)

Query: 16  NSARFFVEQRHIGWVLLVATLVWGVWAWHAMPQRKDPEIPVRAAAVLVAWPGAPAERVEE 75
           N +   V +R I   L++   V G+ A+  + + +DP   V+   ++ AWPGA A+ +++
Sbjct: 7   NLSALAVRERSITLFLILLISVAGLLAFFKLGRAEDPAFTVKVMTIVTAWPGATAQEMQD 66

Query: 76  RITRRVEEAVGGNKWVEKIESVSRTGLSVVTLHLHERVAQTDTVLDDIGFRLQ---EVGQ 132
           ++  ++E+ +   +W ++ E+ +R GL+  TL L +    +    +    R +   E G 
Sbjct: 67  QVAEKIEKRMQELRWYDRTETYTRPGLAFTTLTLLDSTPPSAVQEEFYQARKKIGDETGN 126

Query: 133 LPDGA-GPL 140
           LP G  GPL
Sbjct: 127 LPPGVIGPL 135