Pairwise Alignments

Query, 1236 a.a., AcrB/AcrD/AcrF family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 1040 a.a., efflux RND transporter permease subunit from Ralstonia sp. UNC404CL21Col

 Score =  364 bits (934), Expect = e-104
 Identities = 273/961 (28%), Positives = 456/961 (47%), Gaps = 49/961 (5%)

Query: 279  HTEPGLVVLDVSTRHDAAALSARLAVFRA-ERVGANA--LHPDLWEPAVFASGDDARAAL 335
            +T PGL    ++          +   ++A ++VG     L   +  P V     D   AL
Sbjct: 88   YTRPGLAFTTLTLLDSTPPSEVQEEFYQARKKVGDEVGNLPSGVIGPIVNDEYSDVTFAL 147

Query: 336  EAVAADRYSWRDLEAYTEKVRATLERLGSVGKVSRWGVRPETIFIDWSQERLASLGLDPQ 395
             A+ A     R L    E +R  L  +  V KV+  G + E I++++S +RLA+LG++PQ
Sbjct: 148  FALKAQGEPQRALVRDAETLRQRLLHVPGVKKVNIIGEQAERIYVEFSHDRLATLGVNPQ 207

Query: 396  QVAQTLAARNTSLPGGQLETRGRGVLLDSEGELRSATDLAEVMVATSASGAPLYLRDVAD 455
             V   L  +N     G +ET+G  V +  +G       + +  V +   G  L L D+A 
Sbjct: 208  DVFAALNTQNALAAAGSVETKGPQVFIRLDGAFDELQKIRDTPVVSQ--GRTLKLSDIAT 265

Query: 456  VTRSYRAPVENLNHFVHRDADGTWRRGKAITLAVEMRSGEHIDAFSREVDAALGDLTQRL 515
            V R Y  P      F+ R+         A+ L + MR G +     + +D  +G +   +
Sbjct: 266  VRRGYEDPAT----FMVRNGGQP-----ALLLGIVMREGWNGLDLGKALDKEVGAINADM 316

Query: 516  PEDLLVVRTSDQPRQVTEKVDLFTLSLEEAVVLVVAVAFIGFREWRSALLMALSIPLTLA 575
            P  + + + +DQ   +   VD F L    A+++V+ V+F+    WR+ L++A ++PLTLA
Sbjct: 317  PLGMSLTKVTDQAVNIAASVDEFMLKFFAALLVVMLVSFVSMG-WRAGLVVAAAVPLTLA 375

Query: 576  MTFGMMHLLGIDLQQISIASLILALGLLVDDPVVAGDAIKREIAEGRPRRLAAWLGPTKL 635
            + F +M   G +  +I++ SLILALGLLVDD ++A + +  ++ EG  R  A+    +  
Sbjct: 376  VVFVVMAATGKNFDRITLGSLILALGLLVDDAIIAIEMMVVKMEEGYSRVAASAYAWSHT 435

Query: 636  ARAILYATITNIVAYLPFLLLTGDKGRFLYSMPIVVACSLVASRIVSMTFIPLLGSVLLD 695
            A  +L  T+   V ++P        G +  +M  +V  +L+AS +V++ F P LG  +L 
Sbjct: 436  AAPMLSGTLVTAVGFMPNGFARSTAGEYTSNMFWIVGIALIASWVVAVVFTPYLGVKMLP 495

Query: 696  -----AGRREGTVEERRARGLGRLYYAVGGWAIDHRWKV---LAGSLLLVVAGFWLQGQL 747
                  G  +   +  R     RL     G  I  +W V   + G   L + G  +   +
Sbjct: 496  NFQRVEGGHDAIYDTPRYNRFRRLL----GRVIARKWLVAGAVVGLFALAIGGMAI---V 548

Query: 748  KPQFFPKDRSYLSYVDLWLPEDATVEATARVAADAARIVTDRVAAFDAETGRAAKGLPPA 807
            K QFFP        V++ +P   ++  T     DAA   T ++ A+ A+   A       
Sbjct: 549  KKQFFPISDRPEVLVEVQMPYGTSINQT-----DAA---TAKLEAWLAKQKEA------- 593

Query: 808  LRSVTVFTGGGGPRFWFSVTPELRQPNYAQLLVEVSDNHLTKELIGPLQQALSERL-PSA 866
             + VT + G G PRF+ ++ PEL  P++A++++          L   L+QA+++ L P A
Sbjct: 594  -KIVTAYIGQGAPRFYLAMGPELPDPSFAKIVIRTDSQEERDALKQRLRQAVADGLAPGA 652

Query: 867  RADVMELENGPPIGVPVQLRLYGDDIPALRAESERLKAILRADPDATRVKDNWGADTFVA 926
            R  V +L  GP    PV  R+ G D   LR  +  ++ ++ A P    V  +WG      
Sbjct: 653  RVRVTQLVFGPYSPFPVAYRVTGPDAETLRRIAADVQHVMDASPMMRTVNTDWGTRVPTL 712

Query: 927  RLRVDPDKAALSGVTMLDVARATGNAATGTTVTALREGRLTVPVVSRLRPDERADATDVE 986
               +  D+    G+T   VA+      +G  VTA+RE   TV V +R   + R D   + 
Sbjct: 713  HFTLQQDRLQAVGLTSSAVAQQLQFLLSGIPVTAVREDIRTVQVTARSAGNVRLDPARIG 772

Query: 987  GLYVAGQGGTRVPLAQIAEPEYGMETARIFRRNQQRCVVISCFPREGVLPSEVVARAMPA 1046
               +AG  G R+PL+Q+ + E  ME   + RR++   + +     +G+ P +V       
Sbjct: 773  DFTLAGANGQRIPLSQVGKIEVRMEEPIMRRRDRMPTITVRGDIADGLQPPDVSTAISKQ 832

Query: 1047 IGRFRADLPPGFRLEFGGEHEEQVKGFKELAGVMGISIAMIYMALLFQFRNAVKPLIVFA 1106
            +      LP G+R+E  G  EE  K  K +  +  I +A+  + L+FQ R+    ++VF 
Sbjct: 833  LAPIIEKLPSGYRIEQAGSIEESGKATKAMLPLFPIMLAVTLLILIFQVRSIPAMVMVFL 892

Query: 1107 AIPYGMTGAFAALRLMGQPFGFMAFLGIASLIGVIVSHIIVLFDFIEEKREEGEDLRTAL 1166
              P G+ G    L L GQPFG  A +G+ +L G+++ + ++L   I+  ++EG D   A+
Sbjct: 893  TSPLGLIGVVPTLILFGQPFGINALVGLIALSGILMRNTLILIGQIQHNKDEGLDPFRAV 952

Query: 1167 LDAGIVRLRPVMITVAATVIALFPLALHGGALWEPLCYAQAGGLTVATFVTLLMVPVLYA 1226
            ++A + R RPV++T  A ++A  PL       W  L Y   GG    T +TL+ +P +Y+
Sbjct: 953  VEATVQRARPVILTALAAILAFIPLT--HSVFWGALAYTLIGGTFAGTILTLVFLPAMYS 1010

Query: 1227 I 1227
            I
Sbjct: 1011 I 1011



 Score = 58.2 bits (139), Expect = 4e-12
 Identities = 32/129 (24%), Positives = 67/129 (51%), Gaps = 4/129 (3%)

Query: 16  NSARFFVEQRHIGWVLLVATLVWGVWAWHAMPQRKDPEIPVRAAAVLVAWPGAPAERVEE 75
           N +   V +R +   L+    V G+ ++  + + +DP   V+   ++  WPGA A+ +++
Sbjct: 7   NLSALAVRERAVTLFLICLISVAGLISFFKLGRAEDPAFTVKVMNIVTVWPGATAQEMQD 66

Query: 76  RITRRVEEAVGGNKWVEKIESVSRTGLSVVTLHLHERVAQTDTVLDDIGFRLQ---EVGQ 132
           ++  ++E+ +   +W ++ E+ +R GL+  TL L +    ++   +    R +   EVG 
Sbjct: 67  QVAEKIEKRMQELRWYDRTETYTRPGLAFTTLTLLDSTPPSEVQEEFYQARKKVGDEVGN 126

Query: 133 LPDGA-GPL 140
           LP G  GP+
Sbjct: 127 LPSGVIGPI 135