Pairwise Alignments

Query, 246 a.a., chemotaxis protein MotB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 246 a.a., Flagellar motor protein from Pseudomonas stutzeri RCH2

 Score = 85.1 bits (209), Expect = 1e-21
 Identities = 66/241 (27%), Positives = 108/241 (44%), Gaps = 27/241 (11%)

Query: 11  KPHQHIPQQGWMLTYSDLVTLLLAFFVLLVSMSSVDRVQFERMASSLRQPGDLAGTPEAP 70
           +P +   Q+ W++TY D++TLLL   V++++M+     +    A         A  P   
Sbjct: 17  EPQREEEQEAWLITYLDMLTLLLVMLVIMLTMAGKGDGRQSEQAILDSTALQAASGP--- 73

Query: 71  RTDVSKRLRDLLMDAEALSANAV-EIRSLLFPPQVLPPG-------VEARTVERDVEVLE 122
                    +L +D   +SA+ +  I  +  PP    P        V    +  D+EV+ 
Sbjct: 74  ---------NLALD---MSASPIPSIAPVPAPPVETAPDETDDSDVVSDMALGDDIEVIV 121

Query: 123 NPEGVVIALTHDLLFPQGQDRLPPASLRLLDTLTDVLAGLDADVNVSAHTD----ATEGG 178
           N   +   ++ +LLF  G+  L  A L ++D L   LA     + V  HTD     TE  
Sbjct: 122 NEGSISFRISSELLFGSGRAELEDAGLDVIDQLVPTLAANRYRIVVEGHTDNLPIQTERF 181

Query: 179 ADPWDLSDRRALSVLEHFLQRGMDPARFSVSGYGPDRPLDASASPEAAQRNRRVEILVKT 238
              W+LS  RA SV+ +    G++  R S +GY   RP+  +        NRRVE++++T
Sbjct: 182 PSNWELSASRASSVVRYLQLAGIEARRLSATGYADTRPIADNGDDRGRASNRRVELIMQT 241

Query: 239 A 239
           A
Sbjct: 242 A 242