Pairwise Alignments

Query, 246 a.a., chemotaxis protein MotB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 312 a.a., flagellar motor protein MotB (RefSeq) from Shewanella amazonensis SB2B

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 62/282 (21%)

Query: 21  WMLTYSDLVTLLLAFFVLLVSMSSVDRVQFERMASSLR---------------------- 58
           W+ T++DL++LL+ FFVLL++ S +D ++F+++A S++                      
Sbjct: 16  WLATFADLMSLLMCFFVLLLAFSEMDVMKFKQIAGSMKYAFGVQNKVEVKDIPKGTSVIA 75

Query: 59  ---QPGDLAGTPEAPRTDVSKRLRDLLMD---AEALSANAVEIRS--------------- 97
              +PG    TP       +  + + ++D    E+ SA  V+ +                
Sbjct: 76  LEFRPGKPEPTPIEIINQQTNEMTEPILDFQEGESESAGGVQQQQGSQRGGEASSTAQET 135

Query: 98  ------------LLFPPQV--LPPGVEARTVERDVEVLENPEGVVIALTHDLLFPQGQDR 143
                        L   QV  +   +    V+  +E+    + ++I +     F  G   
Sbjct: 136 AESTQSDSSSSQELINQQVKKMAEQLNEEIVDGAIEIESLGQQIIIRIREKGAFGSGSGF 195

Query: 144 LPPASLRLLDTLTDVLAGLDADVNVSAHTD----ATEGGADPWDLSDRRALSVLEHFLQ- 198
           L P    ++  + ++L  +   + VS +TD    + E  +  WDLS +RA+SV    ++ 
Sbjct: 196 LQPRFRPVIRAVGELLKDVPGIITVSGYTDDMQISNELYSSNWDLSSKRAVSVAHELVKV 255

Query: 199 RGMDPARFSVSGYGPDRPLDASASPEAAQRNRRVEILVKTAK 240
           +G D +R  V G G + PL  + S E   RNRRVEI ++  K
Sbjct: 256 KGFDSSRMKVVGMGSNNPLVPNESAENRARNRRVEIAIEQGK 297