Pairwise Alignments

Query, 246 a.a., chemotaxis protein MotB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 248 a.a., OmpA/MotB domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 87.8 bits (216), Expect = 2e-22
 Identities = 75/228 (32%), Positives = 113/228 (49%), Gaps = 20/228 (8%)

Query: 21  WMLTYSDLVTLLLAFFVLLVSMSSVDRVQFERMASSLRQPGDLAGTPEAPRTDVSKRLRD 80
           W++T SDL  LLLA FVLL SMSSV++  F    SS++Q     G  E  R     RL+D
Sbjct: 21  WLITTSDLSLLLLACFVLLFSMSSVEKGTFSESISSVQQA---LGVGEGARI---VRLKD 74

Query: 81  ----LLMDAEALSANAVEIRSLLFPPQVLPPGVEARTVERDVEVLENPEG-VVIALTHDL 135
                ++D        VE ++ LF    L    ++R +  D+    + +G + + +   +
Sbjct: 75  ENVGSVVDEVLYRRQLVEAQNRLFAEVRL--FAQSRGMS-DILTGSSEDGKITLNMPAGV 131

Query: 136 LFPQGQDRLPPASLRLLDTLTDVLAGL-DADVNVSAHTDAT---EGGA--DPWDLSDRRA 189
           LF  G D +     +LL  + D+     D D+NV   TD++    GG   D WDLS  RA
Sbjct: 132 LFEPGSDTITAEGRKLLQHMYDLFVRHPDQDINVRGFTDSSPTPSGGRFRDNWDLSSSRA 191

Query: 190 LSVLEHFLQRGMDPARFSVSGYGPDRPLDASASPEAAQRNRRVEILVK 237
           ++VL   L  G+ P R + +G     PL  + + E   RNRRVE +++
Sbjct: 192 INVLRTLLDMGIAPHRITATGLADMNPLFPNTTEENRARNRRVEFVLE 239