Pairwise Alignments

Query, 246 a.a., chemotaxis protein MotB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 241 a.a., OmpA/MotB domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 68.2 bits (165), Expect = 1e-16
 Identities = 55/228 (24%), Positives = 102/228 (44%), Gaps = 23/228 (10%)

Query: 21  WMLTYSDLVTLLLAFFVLLVSMSSVDRVQFERMAS------SLRQPGDLAGTPEAPRTDV 74
           W + Y+D VT ++AFF+L+  ++       + +A       SL    +++     P    
Sbjct: 7   WKVAYADFVTAMMAFFLLMWILNMTPPETKQALAGYFSTERSLFDSSNVSPVANNPFVQG 66

Query: 75  SKRL--RDLLMDAEALSANAVEIRSLLFPPQVLPPGVEARTVERDVEVLENPE-GVVIAL 131
             +L  RD  +     S  A+         Q L   + A  + ++   +   + GV++ +
Sbjct: 67  VDKLDTRDFKVSETEKSHYAIA--------QKLKQMMMADAIPQNASGISADDVGVLLRV 118

Query: 132 THDLLFPQGQDRLPPASLRLLDTLTDVLAGLDADVNVSAHTDATEGGADP-----WDLSD 186
             D++F  G   L P   R+LD +  +L   +  + V  H+D+ E  A       W+LS 
Sbjct: 119 NSDVMFKAGSAELVPEGSRVLDEVIKILREYNLYLMVRGHSDSGEVAAGSPYPSNWELSG 178

Query: 187 RRALSVLEHFLQRG-MDPARFSVSGYGPDRPLDASASPEAAQRNRRVE 233
            RA + + + ++ G + P R     Y   RP++ + +PE+  +NRRVE
Sbjct: 179 ARAAAAVRYIIEHGGIKPTRLRGIAYADTRPMEPNTTPESRSKNRRVE 226