Pairwise Alignments

Query, 246 a.a., chemotaxis protein MotB (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 244 a.a., OmpA/MotB domain protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score = 89.7 bits (221), Expect = 5e-23
 Identities = 64/230 (27%), Positives = 113/230 (49%), Gaps = 15/230 (6%)

Query: 17  PQQGWMLTYSDLVTLLLAFFVLLVSMSSVDRVQFERMASSLRQP---GDLAGTPEAPRTD 73
           P Q W+ T +D+  LLL FF+LL ++S++D+ +      S+R      D   +  A R+D
Sbjct: 16  PPQEWLATLADVSMLLLCFFILLFALSTIDKTKITETFDSVRTVFGGKDKELSTSAVRSD 75

Query: 74  VSKRLRDLLMDAEALSANAVEIRSLLFPPQVLPPGVEARTVERDVEVLENPEGVVIALTH 133
            S  L    +++  L    +E +   +    +   +    VE  +  + +   + + +  
Sbjct: 76  ESSAL----LESVRLQRQIIEAQRNTYSE--MRTYLNKTGVEGIIGAVFDEGVITLRIPA 129

Query: 134 DLLFPQGQDRLPPASLRLLDTLTDVLAGL-DADVNVSAHTDATEGGA-----DPWDLSDR 187
           +++F  G+  L P + R L  L D+     D  +N+   TD ++ G      D W+LS  
Sbjct: 130 EVMFAPGETDLSPQAERYLKPLADLFVRKKDQSINIRGFTDDSQPGQNSRFRDNWELSSL 189

Query: 188 RALSVLEHFLQRGMDPARFSVSGYGPDRPLDASASPEAAQRNRRVEILVK 237
           RA+SVL +FL+ G+D  R + +G G   PL  + + E   RNRRVE +++
Sbjct: 190 RAVSVLRYFLKAGIDSKRLTATGLGELDPLFPNTTEENRARNRRVEFMLE 239