Pairwise Alignments

Query, 235 a.a., flagellar biosynthetic protein fliP (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 249 a.a., flagellar biosynthesis protein FliP (RefSeq) from Shewanella amazonensis SB2B

 Score =  209 bits (531), Expect = 5e-59
 Identities = 101/238 (42%), Positives = 163/238 (68%), Gaps = 10/238 (4%)

Query: 1   MAAMAA--QDVVMPTMQLTLAAGRTEPE---KVSLTLEILFMLTVLSLAPAIMLTVTSFT 55
           MA++ A   D V+P + +T     T P+   + S+TL+IL ++T LS  PA+++ +TSFT
Sbjct: 15  MASLPAFGADGVLPAVTVT-----TTPDGGTQYSVTLQILMLMTALSFLPAMVIMLTSFT 69

Query: 56  RIIIVFHFVRQALGVQALPPSQVLASLAIFMTVVIMTPVGKEINDNALQPYLREEIGFNE 115
           RII+    +RQA+G+Q  P +QVL  L++FMT  IM PV  +I +  ++PY+ E +  ++
Sbjct: 70  RIIVTLSLLRQAIGLQQAPSNQVLIGLSLFMTFFIMAPVFDKIYEQGVKPYMEETLPIDQ 129

Query: 116 ALKKAEAPMRTFMFKHTREKDLSVFYAVTKMEQPRSKDDVPTIMLAAGYVISELKTGFTI 175
           A ++ + P++ FM    R  DL  F  +   +  +S ++ P  ++   ++ SELKT F I
Sbjct: 130 AFERGKEPLKAFMLSQVRITDLETFVNIAGYDNIKSPEEAPMTVIIPAFITSELKTAFQI 189

Query: 176 GFLIYIPFLILDMVISSILLAMGMMMLPPMMVSMPFKLLLFVMVDGWGLLVGSLVNSF 233
           GF++++PFL++D+V++SIL+AMGMMML PM+VS+PFK++LFV+VDGW L++G+L NSF
Sbjct: 190 GFMLFVPFLVIDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWSLVMGTLANSF 247