Pairwise Alignments

Query, 235 a.a., flagellar biosynthetic protein fliP (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 254 a.a., flagellar type III secretion system pore protein FliP from Rhodopseudomonas palustris CGA009

 Score =  208 bits (530), Expect = 7e-59
 Identities = 98/231 (42%), Positives = 157/231 (67%)

Query: 3   AMAAQDVVMPTMQLTLAAGRTEPEKVSLTLEILFMLTVLSLAPAIMLTVTSFTRIIIVFH 62
           A+ A         +++  G   P      ++++ +LTVLS+AP+I++ +TSFTRI++V  
Sbjct: 20  AVLAMIAPAQAQDISINLGGNSPGVTERAIQLIALLTVLSIAPSILVMMTSFTRIVVVLS 79

Query: 63  FVRQALGVQALPPSQVLASLAIFMTVVIMTPVGKEINDNALQPYLREEIGFNEALKKAEA 122
            +R ALG    PP+ V+ +LA+F+T  +M P  ++  D  ++P +  EIG ++A+ +A  
Sbjct: 80  LLRTALGTATAPPNAVIIALALFLTAFVMGPTLQKSYDEGIKPLIANEIGVDDAMVRASG 139

Query: 123 PMRTFMFKHTREKDLSVFYAVTKMEQPRSKDDVPTIMLAAGYVISELKTGFTIGFLIYIP 182
           P+R FM K+ REKDL +F  ++    P + +D+   +L   ++ISELK  F IGFL+++P
Sbjct: 140 PLRIFMQKNVREKDLKLFLDLSGEPPPATPEDLSLRILMPAFLISELKRAFEIGFLLFLP 199

Query: 183 FLILDMVISSILLAMGMMMLPPMMVSMPFKLLLFVMVDGWGLLVGSLVNSF 233
           FLI+D+V++SIL++MGMMMLPP++VS+PFKL+ FV+VDGW L+ GSLV S+
Sbjct: 200 FLIIDLVVASILMSMGMMMLPPVVVSLPFKLIFFVLVDGWSLVAGSLVQSY 250