Pairwise Alignments

Query, 235 a.a., flagellar biosynthetic protein fliP (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 216 a.a., type III secretion system protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  151 bits (381), Expect = 1e-41
 Identities = 82/206 (39%), Positives = 127/206 (61%), Gaps = 13/206 (6%)

Query: 38  LTVLSLAPAIMLTVTSFTRIIIVFHFVRQALGVQALPPSQVLASLAIFMTVVIMTPVGKE 97
           + +L LAP  ++ VTS+ +I++V   VR ALGVQ +PP+ V+  LAI +++ IM P+ + 
Sbjct: 13  MALLGLAPFFLMMVTSYVKIVVVTSLVRNALGVQQVPPAMVMNGLAIILSIFIMAPMVES 72

Query: 98  INDN------ALQPYLREEIGFNEALKKAEAPMRTFMFKHTREKDLSVFYAVTKMEQPRS 151
             D       + QP  RE +   E L +A  P+R F+ ++  +K ++ F    K   P+ 
Sbjct: 73  TLDILKTVRVSEQPEPREVV---ELLDRASPPLRDFLSRNADDKVITAFMGTAKRIWPKE 129

Query: 152 KDDV----PTIMLAAGYVISELKTGFTIGFLIYIPFLILDMVISSILLAMGMMMLPPMMV 207
           + D       ++L   + ISEL   F IGFL+Y+PF+ +D++IS+ILLAMGMMM+ PM +
Sbjct: 130 RHDTIRRENLLILVPAFTISELTKAFQIGFLLYLPFVAIDLIISNILLAMGMMMVSPMTI 189

Query: 208 SMPFKLLLFVMVDGWGLLVGSLVNSF 233
           S+PFKLLLFV +DGW  +   L+ S+
Sbjct: 190 SLPFKLLLFVTLDGWLKISQGLLLSY 215