Pairwise Alignments

Query, 235 a.a., flagellar biosynthetic protein fliP (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 247 a.a., flagellar biosynthetic protein FliP (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  218 bits (555), Expect = 9e-62
 Identities = 106/234 (45%), Positives = 162/234 (69%), Gaps = 4/234 (1%)

Query: 1   MAAMAAQDVVMPTMQLTLAA-GRTEPEKVSLTLEILFMLTVLSLAPAIMLTVTSFTRIII 59
           + +  A D V+P + +  AA G TE    S+T++IL ++T LS  PA+++ +TSFTRII+
Sbjct: 16  VTSAGAADGVLPAVTVKTAADGSTE---YSVTMQILLLMTSLSFIPAMVIMLTSFTRIIV 72

Query: 60  VFHFVRQALGVQALPPSQVLASLAIFMTVVIMTPVGKEINDNALQPYLREEIGFNEALKK 119
           V   +RQA+G+Q  P +QVL  +++FMT  IM PV  +I D  ++PY+ E++   +A  K
Sbjct: 73  VLSILRQAIGLQQTPSNQVLIGMSLFMTFFIMAPVFDKIYDQGVKPYIDEQLTLQQAFDK 132

Query: 120 AEAPMRTFMFKHTREKDLSVFYAVTKMEQPRSKDDVPTIMLAAGYVISELKTGFTIGFLI 179
            + P+R FM    R  DL  F  ++  +   S ++ P  +L   ++ SELKT F IGF++
Sbjct: 133 GKEPLRAFMLGQVRTTDLKTFIDISGYQNINSPEEAPMSVLVPAFITSELKTAFQIGFML 192

Query: 180 YIPFLILDMVISSILLAMGMMMLPPMMVSMPFKLLLFVMVDGWGLLVGSLVNSF 233
           ++PFL+LD+V++SIL+AMGMMML PM+VS+PFK++LFV+VDGWGL++G+L NSF
Sbjct: 193 FVPFLVLDLVVASILMAMGMMMLSPMIVSLPFKIMLFVLVDGWGLVMGTLANSF 246