Pairwise Alignments

Query, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 249 a.a., 23S rRNA (guanosine-2'-O-) -methyltransferase rlmB (EC 2.1.1.-) from Xanthomonas campestris pv. campestris strain 8004

 Score =  114 bits (286), Expect = 1e-30
 Identities = 80/235 (34%), Positives = 116/235 (49%), Gaps = 11/235 (4%)

Query: 10  GLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMRVRFSLVEGQVLDKLYAGG- 68
           G+  V   + +D   +  V I  G + P    + +  R   +    V  Q LD +  GG 
Sbjct: 10  GVNAVASSVENDADNVREVLIEAGSKNPRLTEIEEQARRKGIDVRRVNTQALDGV--GGQ 67

Query: 69  --HQGVVARLFEA---GYVELDDLLQDAPDAPLPLIIALDQVQDPGNAGTLARSLYALGG 123
             HQGV AR   A      EL+ L++ A    L LI  LD VQDP N G   RS  A G 
Sbjct: 68  VRHQGVAARYAAARLWAENELEGLVEAAQGRALVLI--LDGVQDPHNLGACLRSAAAAGV 125

Query: 124 AGLIVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGSV 183
             +++P+  +A + A   + +AGA +++PV  V NLAR L +  + G  +YG + GE   
Sbjct: 126 TAVVIPKDKSATVNATVRKTSAGAADRIPVVAVTNLARCLRDLQKQGVWLYG-LAGEAEA 184

Query: 184 NAFTATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLL 238
           + ++  LR    LVLG E  G+R    + CD L+ IPM  D +S NV+ A  + L
Sbjct: 185 SLYSVDLRGNVGLVLGGEGDGLRRLTREHCDGLVKIPMPGDIESLNVSVATGVTL 239