Pairwise Alignments

Query, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 300 a.a., hypothetical tRNA/rRNA methyltransferase yfiF [EC:2.1.1.-] from Xanthomonas campestris pv. campestris strain 8004

 Score = 92.4 bits (228), Expect = 9e-24
 Identities = 70/240 (29%), Positives = 112/240 (46%), Gaps = 4/240 (1%)

Query: 8   LPGLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMRVRFSLVEGQVLDKLYAG 67
           L G+  +  +  + P  +  +++   R  P    L+  C   R+ + +VE   L KL + 
Sbjct: 61  LYGINAIQAVFKARPQALRKIYLTEAR-IPQFKALLAWCVAQRLGYRVVEEADLTKLASS 119

Query: 68  GH-QGVVARLFEAGYVELDDLLQDAPDAPLPLIIALDQVQDPGNAGTLARSLYALGGAGL 126
            H +G+VA +       L D L   P  P+ L + LD V +P N G + RS    G AGL
Sbjct: 120 THHEGIVAEVLRVPPQPLQDWLAALPQGPV-LALWLDGVGNPHNFGAILRSSAHFGVAGL 178

Query: 127 IVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGSVNAF 186
           ++P  +   L   A R A G  E +P+ ++ + A+A+ +  +AG+A+  A   +G  + F
Sbjct: 179 LLPAGSTLGLSGTAARVAEGGAEAVPLVQLPDNAQAMAQLRQAGFAV-AATLVDGGQDVF 237

Query: 187 TATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLLGCFAAPLL 246
              L    V V+G E +G+    A  CD  L I      +S NVA A A+    + A  L
Sbjct: 238 ATALPQRLVYVMGAESEGMDRQFASACDLQLSIHGSGLVESLNVASATAVFQAAWRARAL 297