Pairwise Alignments

Query, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 246 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  116 bits (291), Expect = 4e-31
 Identities = 82/233 (35%), Positives = 114/233 (48%), Gaps = 8/233 (3%)

Query: 10  GLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDL---CREMRVRFSLVEGQVLD-KLY 65
           G+  V  LL + P R+  +++ +GR   D  RLM L     E  V       + LD K  
Sbjct: 9   GIHAVEALLKNSPERVIEMWVLQGR---DDQRLMPLIAMAAEYGVSVQQASRKALDDKAG 65

Query: 66  AGGHQGVVARLFEAGYVELDDLLQDAPDAPLPLIIALDQVQDPGNAGTLARSLYALGGAG 125
           +  HQGV+ R   A  +  +DLL        P ++ LD V DP N G   R+  A G  G
Sbjct: 66  SSQHQGVLVRAKPAKQLNDNDLLALLDKTETPFLLILDGVTDPHNLGACLRNADAAGVHG 125

Query: 126 LIVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGSVNA 185
           +IVPR N+  L     + A GA E +P+ +V NLAR +    E G  I GA  GE   + 
Sbjct: 126 VIVPRDNSVGLTPTVSKVACGAAEVVPLFQVTNLARTMKALQEKGVWIVGA-AGEAEHDL 184

Query: 186 FTATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLL 238
           + A L+ P  + +G EDKG+R    + CD+L  IPM     S NV+ A  + L
Sbjct: 185 YKADLKGPIAIAMGAEDKGLRRLTRESCDSLASIPMAGSVSSLNVSVATGICL 237