Pairwise Alignments

Query, 249 a.a., RNA methyltransferase, TrmH family, group 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 247 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase from Burkholderia phytofirmans PsJN

 Score =  105 bits (261), Expect = 1e-27
 Identities = 78/235 (33%), Positives = 110/235 (46%), Gaps = 7/235 (2%)

Query: 7   VLPGLKPVLELLASDPARIDTVFIRRGRRTPDTDRLMDLCREMRVRFSLV-EGQVLDKLY 65
           VL G   V   +  D + ++ V+    R+       +   +E  VR     E ++    +
Sbjct: 6   VLYGFHAVTARMRHDASTVEEVYYDATRKDRRMTEFLHAAKEAGVRLIAADETRLWGLAH 65

Query: 66  AGGHQGVVARLFEAGYVELDDLLQDAPDA--PLPLIIALDQVQDPGNAGTLARSLYALGG 123
              HQGVVAR   AG + L   L +  D     PLI+ LD V DP N G   R   A G 
Sbjct: 66  TERHQGVVAR---AGDMPLAQNLAELLDGINGSPLILVLDGVTDPHNLGACLRVADAAGA 122

Query: 124 AGLIVPRHNAAYLGAGAHRAAAGALEKLPVARVANLARALDEAAEAGYAIYGAMCGEGSV 183
             +I PR  A  L A A + A+GA + +P   V NLARAL E  +AG  + G   GE + 
Sbjct: 123 HAVIAPRDRAVGLNATAAKVASGAADTVPYITVTNLARALRELKDAGVWVVGT-AGEATK 181

Query: 184 NAFTATLRTPCVLVLGNEDKGIRPNVAKRCDTLLHIPMLRDFDSFNVAQAGALLL 238
           + +   L  P  LV+G E +G+R      CD ++ IPM    +S NV+ A  + L
Sbjct: 182 SLYDTELDGPVALVMGAEGEGMRRLTRDTCDVVMQIPMAGTVESLNVSVASGVCL 236