Pairwise Alignments

Query, 760 a.a., DNA topoisomerase I (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 666 a.a., hypothetical protein from Cupriavidus basilensis FW507-4G11

 Score =  164 bits (414), Expect = 2e-44
 Identities = 161/601 (26%), Positives = 246/601 (40%), Gaps = 87/601 (14%)

Query: 73  KADTVYLAPDPDREGEAIAWHVAALIEGKADNIKRIQFNEITARAVREALEN--PRDLNR 130
           +A  + +A D DREGE IA  +     G    + R+  +     +VR+AL    P     
Sbjct: 92  QASELVIATDADREGEVIAREMMQAA-GYRGPVSRLWLSAFDDASVRKALGKLLPGAKTA 150

Query: 131 ALFDAQQARRVLDRLVGYKLSPLLWKKVKRG-----ISAGRVQSVALRLIVDRESERRAF 185
            ++ A   R   D L G  ++ +L      G     +  GRVQ+  L L+V RE   R F
Sbjct: 151 PMYAAGLGRSRADWLAGMNVTMMLTTGFGTGGKGGTLHFGRVQTPVLALVVRRERAIRTF 210

Query: 186 TPEEYWLFRAMFAKNVPG-ATPTSPDPQYAPFKAELAKIDGKKAHVADADAANALEDAMR 244
            P+ Y+  +A F   + G A P +  P  A     L   DG   HVA A  A ++ D +R
Sbjct: 211 VPKAYYELQASF--ELAGVAVPMAWRPAPA-----LLDPDG---HVAQAATAKSVADKVR 260

Query: 245 GKPFVITAVERKKRERQPQPPFITSTLQQAANQRLGYSAKRTMNIAQRLYEGVELGEMGT 304
           G+P  +  VE       P   F  ++LQ+ A+ R G  A+  ++  Q LYE  +      
Sbjct: 261 GQPGRVDHVEAGPEREAPPLLFSLASLQREASARYGIKAQAVLDACQALYEKHKA----- 315

Query: 305 VALITYMRTD-----SVRVSDEAR-----DAARAFVTETWGADFCPAKPRQFKTKGSAQD 354
               TY RTD     S  +++ A       AAR  +          +  R F  +     
Sbjct: 316 ---TTYPRTDCEYLPSSMLAETAMVLQGIRAARPDMASLLACADPSSTSRAFNDRKIT-- 370

Query: 355 AHEAVRPVDVNVTPDSVKHLLPPDQFQLYRLVWSRFVASQMAPARFDDTTVAIACGPAEW 414
           AH A+ P   ++ P      +   +  +Y ++  R++A  +    F  T + + C    +
Sbjct: 371 AHHAIIP---SLNPRVSVGNMSKSEQTIYDMIARRYLAQFLGDFHFHKTVIEVVCAGERF 427

Query: 415 RAKGERMLFPGFLAAMPQKE-----------EGDAELPPLQEGETLHPVSVEKEQKFTQP 463
           R  G+    PG+  A P+++           E  A LP  Q G+    +  +   + T+P
Sbjct: 428 RVSGKTPQVPGWKRAYPEEQDKPNTKDAPPAEDVAALPSAQTGDPARNLHCDAVSRKTKP 487

Query: 464 PARYTEASLV-------------------RELEERGIGRPSTYASIISTLIDRDYTRLED 504
           P RYTE +L+                   R  E+ GIG  +T A+II  L  RDY   E 
Sbjct: 488 PRRYTEGTLIAAMESIDKEIEDERLRKIMRNKEKAGIGTDATRAAIIENLFKRDYLATEK 547

Query: 505 KHFVPTDLGATVCDLLARHFTTLMDVGFTAQMEDSLDKVAEGGLDWVELLSRFSADFNPT 564
           K  +PT  G  +  L+  +   L D   TA+ ED L ++  G L     L  F  + +  
Sbjct: 548 KQVLPTPRGEALITLIEANAPQLADPVLTAEWEDRLMQLEAGTL----TLEVFEGELSTW 603

Query: 565 LESAAKAMETVKGGLP-----------TDVTCPECGKPVVVKFGKAGPFLACTAYPDCKF 613
           L      +++V    P           +   CP CGKP+       GPF  C+ YPDC  
Sbjct: 604 LSELIARLKSVARTAPQRPDMPHAMPDSTEPCPACGKPMRSLKSAKGPFWGCSGYPDCSV 663

Query: 614 T 614
           T
Sbjct: 664 T 664