Pairwise Alignments

Query, 459 a.a., transcriptional regulatory protein zraR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 495 a.a., sigma-54 dependent transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score =  338 bits (868), Expect = 2e-97
 Identities = 195/485 (40%), Positives = 281/485 (57%), Gaps = 33/485 (6%)

Query: 6   VLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREK---ARDAVLMDVRMARMGG 62
           +LI DDD   R ++  M++  GY     D G+ AVE +      A DAV++D+ M  + G
Sbjct: 5   ILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEALTAPDAPAIDAVVLDLVMPGLDG 64

Query: 63  IEALRRIVEYNPAVPVLIMTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDHT 122
           +  L +I      VPV++ TA+  ++  V A+R GA+D++ KP+  + L+ +L  AL+ +
Sbjct: 65  LGVLSKIRASGLDVPVIVQTAHGGIDNVVSAMRAGAHDFVVKPVGIERLQVSLRNALNAS 124

Query: 123 RLVSENRELKSRLDDAARAPGIIGRSAPMRELAELVATVAPSEATVLITGESGTGKELVA 182
            +  E + ++   +       II RS  M  +       A S   VLI GESG GKEL A
Sbjct: 125 AMKGELQRIRHAREGRLTFSDIITRSEAMAPVLRAAEKAAGSAIPVLIEGESGVGKELFA 184

Query: 183 RSLHEGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTLFL 242
           R++H  S R +K  V VNC A+ ++L+ES LFGHE+GAFTGA +R DG+FV+A GGTLFL
Sbjct: 185 RAIHGSSDRRSKPFVAVNCGAIPDNLVESILFGHEKGAFTGATERHDGKFVEASGGTLFL 244

Query: 243 DEIGELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFREDLF 302
           DE+ ELPL  Q KLLRALQ+G ++ VG   P+ VDVR+++ATNR L + V AG+FREDLF
Sbjct: 245 DEVSELPLAAQVKLLRALQEGAVEAVGGRRPVKVDVRIISATNRRLLDRVKAGQFREDLF 304

Query: 303 YRLNVIGIHMPALRERPDDIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGNVR 362
           YRL+V+ + +P LR R +DIP L  HFL R+    ++ + G T +AM  L +  WPGN+R
Sbjct: 305 YRLHVLPLTIPPLRTRREDIPPLLRHFLMRFCAEEKRSIGGITGEAMVRLAQLDWPGNIR 364

Query: 363 ELENAVERAVIMATGDWVGERELPMSLRGAGGADPA-----------------VADAALP 405
           +LENAV RAV+M+ GD +G  + P+++  A    PA                 VA + +P
Sbjct: 365 QLENAVYRAVVMSDGDQLGLADFPLAI--APSVVPAEDTTGEPLVIERSEPQFVAASEVP 422

Query: 406 TGQDPYAG-----------LSLEDLERRAIVATLRETGDNKSEAARRLGITRATLHNKLK 454
               P  G             L+++ER  I   +       SE ARRL I R+TL+ KL 
Sbjct: 423 IAPLPSVGNLSMLTADDEVRPLDEMEREIIRFAISHYRGQMSEVARRLKIGRSTLYRKLD 482

Query: 455 KYDLE 459
           + + +
Sbjct: 483 EIEAD 487