Pairwise Alignments

Query, 459 a.a., transcriptional regulatory protein zraR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 450 a.a., two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  344 bits (883), Expect = 3e-99
 Identities = 195/453 (43%), Positives = 278/453 (61%), Gaps = 11/453 (2%)

Query: 6   VLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREKARDAVLMDVRMARMGGIEA 65
           +L+V+D+   R ++  ML    Y  + AD  E A+  ++  A D V  D ++ ++ G++ 
Sbjct: 8   ILVVEDEPDQRALIVQMLTANQYLVESADSVEQAIVMIKASAPDLVFSDWKLGQLTGMDL 67

Query: 66  LRRIVEYNPAVPVLIMTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDHTRLV 125
           L  +   +P +  +I TAY ++  AV+A++ GA DYL KP     L   +E+      L 
Sbjct: 68  LNYVRREHPDMGFIIATAYGTITHAVDAMQAGADDYLAKPYQRQSLLLAIEKVAKSIALK 127

Query: 126 SENRELKSRLDDAARAPGIIGRSAPMRELAELVATVAPSEATVLITGESGTGKELVARSL 185
            +NR L S L       G++GRSA M+++ + V  V+ ++ATVLI GESGTGKEL AR+L
Sbjct: 128 RQNRRLSSELSQQQELVGLVGRSALMQKVYQRVQRVSATDATVLIGGESGTGKELAARAL 187

Query: 186 HEGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTLFLDEI 245
           ++ S RS K  V +NC A+ ESL E+ELFG E+GA+TGA+ ++ G+   ADGGT+FLDEI
Sbjct: 188 YQLSARSHKPFVAINCGAIPESLAEAELFGAEKGAYTGANTQKIGKLEAADGGTVFLDEI 247

Query: 246 GELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFREDLFYRL 305
           GELPLL Q KLLR LQ+G I R+G +  + +DVR++AAT+RDL++EVA GRFREDL+YRL
Sbjct: 248 GELPLLQQTKLLRFLQEGVISRLGQNSEIKLDVRVIAATHRDLQQEVAEGRFREDLYYRL 307

Query: 306 NVIGIHMPALRERPDDIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGNVRELE 365
           NV+ IHMPALRERP+DI  L  HFL  +A +    +   +   +  LL H WPGNVREL 
Sbjct: 308 NVVPIHMPALRERPEDIGRLVEHFLKLHANQYGMEVPKLSRDTLKSLLDHSWPGNVRELA 367

Query: 366 NAVERAVIMATGDWVGERELPMSLRGAGGADPAVADAALPTGQDPYAGLSLEDLERRAIV 425
           N +ER V++  GD   E E+   L    GA P   D        P AG+  E  E+  + 
Sbjct: 368 NRIERFVLL--GD---EEEMVQEL----GAAPQPLDT--KRFVLPEAGIEWESFEKDCLR 416

Query: 426 ATLRETGDNKSEAARRLGITRATLHNKLKKYDL 458
             L     N+++AA+ LG++      +L+KY L
Sbjct: 417 QALDRFEGNRTKAAKCLGLSYKAFLYRLEKYQL 449