Pairwise Alignments

Query, 459 a.a., transcriptional regulatory protein zraR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 459 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  367 bits (943), Expect = e-106
 Identities = 202/453 (44%), Positives = 288/453 (63%), Gaps = 3/453 (0%)

Query: 6   VLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREKARDAVLMDVRMARMGGIEA 65
           +L++DD+  +  +L  +L   GY     +D ET +  + E   D ++ D++M ++ G E 
Sbjct: 7   LLVLDDEKNYLLVLEALLTDAGYTVTALNDPETGLAFLEESEVDVIVTDMKMPKITGREV 66

Query: 66  LRRIVEYNPAVPVLIMTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDHTRLV 125
           L ++ +  P +PVLIMTA+ S+E+AVE ++ GA+DY+TKP   D L  ++  A + +R+ 
Sbjct: 67  LEQVKKNWPHIPVLIMTAFGSIESAVEVMKYGAFDYITKPFSNDELLLSVHNAAELSRMH 126

Query: 126 SENRELKSRLDDAARAPGIIGRSAPMRELAELVATVAPSEATVLITGESGTGKELVARSL 185
            + R L+  L++      IIG+S  +RE   +V   APS +TVLI+GESGTGKELVAR++
Sbjct: 127 RQYRVLRENLEERYGMHQIIGKSRAIRETLGMVDRAAPSRSTVLISGESGTGKELVARAI 186

Query: 186 HEGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTLFLDEI 245
           H  S R+    V+VNC AL+  +LESELFGHE+G+FTGA   R GRF QA GGTLFLDEI
Sbjct: 187 HFSSPRNKGPFVSVNCMALNPGVLESELFGHEKGSFTGAVAMRRGRFEQAGGGTLFLDEI 246

Query: 246 GELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFREDLFYRL 305
           GEL   LQ KLLR LQ+   +RVG    + VD+R++AATN++L+EEV  G FREDLFYRL
Sbjct: 247 GELTPELQVKLLRVLQERRFERVGGTEEVEVDIRIVAATNKNLQEEVEKGNFREDLFYRL 306

Query: 306 NVIGIHMPALRERPDDIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGNVRELE 365
           NV+ I +P LRER +DI LL AHF+D+ A  N    K FTP+A+D +  + WPGN+R+L+
Sbjct: 307 NVVHIALPPLRERREDIHLLVAHFVDKLARENGVTPKTFTPEALDYMTGYEWPGNIRQLQ 366

Query: 366 NAVERAVIMATGDWVGERELPMSLRGAGGADPAVADAALPTGQDPYAGLSLEDLERRAIV 425
           N VER +++ +GD +   +LP  LR       +  D  LP   D     +LE +E   I 
Sbjct: 367 NVVERCLVLVSGDTIRVDDLPPELRDEESQLKSAVD-LLPVQLD--LADTLERIEAALIR 423

Query: 426 ATLRETGDNKSEAARRLGITRATLHNKLKKYDL 458
             L      + +AA  L I+++ L  KLKKY++
Sbjct: 424 RALVRADFVQVKAAELLAISKSLLQYKLKKYNI 456