Pairwise Alignments

Query, 459 a.a., transcriptional regulatory protein zraR (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 456 a.a., two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  553 bits (1426), Expect = e-162
 Identities = 285/455 (62%), Positives = 349/455 (76%), Gaps = 8/455 (1%)

Query: 2   SDVTVLIVDDDVAHRTMLRTMLRGWGYATDEADDGETAVEKVREKARDAVLMDVRMARMG 61
           S   +L+VDDD  HR ML+T+L  WGY T+ A DGETAV   RE   D +LMD+RM  M 
Sbjct: 5   SGTRLLVVDDDTTHRGMLQTLLADWGYRTECAGDGETAVTLCRETPFDLILMDLRMGVMS 64

Query: 62  GIEALRRIVEYNPAVPVLIMTAYSSVETAVEALRLGAYDYLTKPLDFDVLRHTLERALDH 121
           GI ALR I  YNPA+P+LIMTAYS+VE+AV+A+R GAYDYLTKPLDF+ LR TLERALDH
Sbjct: 65  GIGALREIRAYNPAIPILIMTAYSNVESAVDAIRSGAYDYLTKPLDFEELRLTLERALDH 124

Query: 122 TRLVSENRELKSRLDDAARAPGIIGRSAPMRELAELVATVAPSEATVLITGESGTGKELV 181
             L  EN  LK+ L  +    GIIG+S  M  L +++A++APSEATVL+TGESGTGKEL+
Sbjct: 125 AALRDENAALKTTLASSFDPAGIIGQSQSMHRLMDMMASIAPSEATVLVTGESGTGKELI 184

Query: 182 ARSLHEGSRRSAKQLVTVNCAALSESLLESELFGHERGAFTGADKRRDGRFVQADGGTLF 241
           AR++H  S+R     VTVNCAAL+E+LLESELFGHE+GAFTGA+KRR+GRF  AD GT+F
Sbjct: 185 ARAIHANSQRRHGPYVTVNCAALTETLLESELFGHEKGAFTGAEKRREGRFQSADKGTIF 244

Query: 242 LDEIGELPLLLQAKLLRALQQGEIQRVGSDVPLTVDVRLLAATNRDLREEVAAGRFREDL 301
           LDEIGE  L +QAKLLRA+Q+ EIQRVGSD  L VDVR++AATNRDLR EV AGRFR+DL
Sbjct: 245 LDEIGETSLPMQAKLLRAIQEREIQRVGSDQTLRVDVRIIAATNRDLRAEVEAGRFRQDL 304

Query: 302 FYRLNVIGIHMPALRERPDDIPLLAAHFLDRYAERNRKHLKGFTPQAMDMLLKHPWPGNV 361
           +YRLNV+ +H+P LRER +DIPLLA HFL R+ E+N K +KGFTPQAMD LLKH WPGNV
Sbjct: 305 YYRLNVVTLHVPPLRERVEDIPLLAGHFLRRFTEKNGKRVKGFTPQAMDRLLKHDWPGNV 364

Query: 362 RELENAVERAVIMATGDWVGERELPMSLRGAGGADPAVADAALPTGQDPYAGLSLEDLER 421
           RELENA ERAV++  G+++ ERELP ++ G  G     A  A+P     + G++LE++ER
Sbjct: 365 RELENAAERAVVLLVGEYISERELPHAIAGGDGD----ATCAVPR----FNGMTLEEIER 416

Query: 422 RAIVATLRETGDNKSEAARRLGITRATLHNKLKKY 456
            AI+  +  +  NKSEAARRLGITR TLH KL +Y
Sbjct: 417 AAILDAMDASEGNKSEAARRLGITRKTLHAKLNRY 451