Pairwise Alignments

Query, 593 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 733 a.a., PAS/PAC sensor signal transduction histidine kinase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  622 bits (1605), Expect = 0.0
 Identities = 348/636 (54%), Positives = 423/636 (66%), Gaps = 62/636 (9%)

Query: 2   TVLPTLQKNIRRAFGRLMLLFGCLGALLVLAFFIAGRLPTLLVRMNYDSIAYVRQMEEAV 61
           T LPTLQK IRR F RL+ LFG LG +LV A F AGR+P LLVRMNYDSIA+VR+ME A+
Sbjct: 64  TTLPTLQKRIRRDFLRLVGLFGVLGIVLVGAVFAAGRMPNLLVRMNYDSIAWVREMETAM 123

Query: 62  FALRLPEQHVPHGHQGREAAFDEALARASANVTEPDEPQAIEAVRNAWDQFRE------- 114
             LR   Q+      G  AAF+ AL RA  N+TEPDEPQA+  +R AW  FR        
Sbjct: 124 NGLRFAAQYPERDGAGWAAAFEAALDRAERNITEPDEPQALTDIRAAWIDFRRVATGAPP 183

Query: 115 -------------SRDDESYAHLHTALVHLVDVNERGMFRRLDRSNLYRNLTLAGAVVVF 161
                        +  D ++A L  AL  LV+VNERGMFRRLDR+ L R+ T+ GA  +F
Sbjct: 184 SHAPDAPDAPDAPNAVDTAHARLRAALAALVEVNERGMFRRLDRNTLLRDATVMGAAALF 243

Query: 162 LAGTLWAMFLADAVSMRLSHPLRRMAELLKDRPPLGTRLHLPAPQTLEVRILFDEFERQW 221
           LAGTLWA+ LAD+++ R+SHPLRR AE+ K+RP LG  LHLP PQTLEVR+LFDE  R W
Sbjct: 244 LAGTLWAVLLADSIAARVSHPLRRAAEVFKERPRLGAPLHLPPPQTLEVRVLFDELVRLW 303

Query: 222 TRLGELDTVNLNRLLREKRKLEVILESADDAIIVMDNTGCVAHVSRSMTTLLGMPEHELL 281
            RL ELD +N+  L  EKRKLEVILESADDAI+V+D  G VAHVS  M  LLG+   ++L
Sbjct: 304 GRLSELDALNVGSLTAEKRKLEVILESADDAILVLDGAGTVAHVSERMLPLLGLAREQVL 363

Query: 282 GQPWHDLSTMDENYLALRGILRDDLVGKGEVELTCNGEPRVFIVRRRSLHDG-------V 334
           G PW DLST   NYLALRG L   L GK +V LT  GE RVF+ RRR L  G       V
Sbjct: 364 GMPWADLSTAAPNYLALRGALDASLHGKRDVPLTEGGEERVFVARRRDLVGGDGHRLAEV 423

Query: 335 RTDG---------------------------------GQVFLLGDVTEKKRRESLRSEMM 361
             DG                                 GQVFLLGDVTE +RRE LRSEMM
Sbjct: 424 GGDGHGLPEIDRDGRARPASSIAHHSHGSPASPTSVVGQVFLLGDVTEARRREGLRSEMM 483

Query: 362 DWISHELKTPVQSLGLAAELLG-RQDTQDDDMRLLVDTIREDAVRLRTVSRQFMDIARMR 420
           DW+SHELKTP+QSL LAA+LL  R+DT D + RLLV+T+ EDA RLRT+++QFMDIARM 
Sbjct: 484 DWVSHELKTPMQSLCLAADLLDRRKDTLDAEGRLLVETVYEDAARLRTLAQQFMDIARMT 543

Query: 421 VDMLRLERRDVDMAQRLGAWLTPFRLLAREKGVGMEVDVRQAPAVVSVDEDRFSWVVSNL 480
              L L R + D+   L  WLTPF LLARE GV + VD R+AP  V +D +RF+WVVSNL
Sbjct: 544 PSALHLTRDEADLPALLDRWLTPFVLLARETGVRLAVDAREAPVKVRLDAERFAWVVSNL 603

Query: 481 VANSLQASPRNTTLTVRLTEASGDLTLTVEDEGPGVPRELEERMFEPYSHGRAAGTKLGL 540
           VAN+L+ASP +  + VR++E  G   + VEDEG G+P  ++ R+F+P++HG AAG + GL
Sbjct: 604 VANALRASPTDGEVRVRVSEHQGRAVIEVEDEGAGLPEAVQARLFQPFAHGPAAGARGGL 663

Query: 541 VGLGLAISRTIVEAHGGRLAYERRDGR-SLFTVHIP 575
            GLGLAI+R+IV+AHGG +AYERR+ R S FTV +P
Sbjct: 664 YGLGLAITRSIVDAHGGHIAYERREERGSRFTVTLP 699