Pairwise Alignments

Query, 593 a.a., sensory box histidine kinase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 482 a.a., two-component system histidine kinase, FrrD (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  124 bits (311), Expect = 9e-33
 Identities = 105/440 (23%), Positives = 213/440 (48%), Gaps = 31/440 (7%)

Query: 143 LDRSNLYRNLTLAGAVVVFLAGTLWAMFLADAVSMRLSHPLRRMAELLKDRPPLGTRLHL 202
           L+R+ L+ ++T    ++  L    W       +   +S P++ + + + +         L
Sbjct: 49  LERALLWISVTGGICILTGLTLLYW-------LPRTISKPIKELKQGILEIANHNYEERL 101

Query: 203 PAPQTLEVRILFDEFERQWTRLGELDTVNLNRLLREKRKLEVILESADDAIIVMDNTGCV 262
                 E R + + F R   RL E     L  +L  K+ +E I+ S DD II ++    +
Sbjct: 102 DMRNNQEFREVAESFNRMAERLAEYRASTLADILSAKKFIEAIVNSIDDPIIGLNMDREI 161

Query: 263 AHVSRSMTTLLGMPEHELLGQPWHDLSTMDENYLALRGILRDDLVGKGE----VELTCNG 318
             ++     +L +    ++ +   +LS  ++    LR ++R+ LV  G+    +++  + 
Sbjct: 162 LFINEEALNVLNLKRGNVIRKSAEELSLKND---LLRRLIRE-LVTPGDQKEPLKIYADD 217

Query: 319 EPRVFIVRRRSLHDGVRTDGGQ--------VFLLGDVTEKKRRESLRSEMMDWISHELKT 370
           +   F   + S    + TD G+        V LL ++TE K  +S ++  +  ISHELKT
Sbjct: 218 KESYF---KASYIPIINTDAGKDEPSKLGDVILLKNITEFKELDSAKTTFISTISHELKT 274

Query: 371 PVQSLGLAAELL--GRQDTQDDDMRLLVDTIREDAVRLRTVSRQFMDIARMRVDMLRLER 428
           P+ ++ ++ +LL   R    +D+   L  +I+E++ RL +++ + +++ ++    L+L  
Sbjct: 275 PIAAIMMSLQLLEDKRVGELNDEQEQLSKSIKENSERLLSITGELLNMTQVEAGKLQLMP 334

Query: 429 RDVDMAQRLGAWLTPFRLLAREKGVGMEVDV-RQAPAVVSVDEDRFSWVVSNLVANSLQA 487
           +     + +   +   ++ A +  + +EV+   +    + VD ++ +WV++NL++N+++ 
Sbjct: 335 KITKPIELIEYAIKANQVQADKFNIQIEVEYPEEKIGKLFVDSEKIAWVLTNLLSNAIRY 394

Query: 488 SPRNTTLTVRLTEASGDLTLTVEDEGPGVPRELEERMFEPYSHGRAAGTKLGLVGLGLAI 547
           S  N  + +   +    + L V+D G G+     + +F+ Y   R  GTK+   GLGL+I
Sbjct: 395 SKENGRVVIGARQEGDMIDLYVQDFGKGIDPRYHKSIFDRYF--RVPGTKVQGSGLGLSI 452

Query: 548 SRTIVEAHGGRLAYERRDGR 567
           SR  VEAHGG L  E   G+
Sbjct: 453 SRDFVEAHGGTLTVESELGK 472