Pairwise Alignments

Query, 454 a.a., PDZ domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 250 a.a., uncharacterized iron-regulated protein-like protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 49.7 bits (117), Expect = 1e-10
 Identities = 62/256 (24%), Positives = 93/256 (36%), Gaps = 57/256 (22%)

Query: 73  SDVVRRLAGADYILVGESHTSPCDHRQQARLLRLLTDAGLRPVVGLEMLPTATNPALWRL 132
           S+ + +L  AD I++GE H SP  H  QA  +  +    L      EML       L  L
Sbjct: 3   SEDLTQLPQADVIILGELHDSPIHHLNQATAVAAIAPRAL----VFEMLSPGQVQGLTEL 58

Query: 133 SAGSLGIDALPDAVDWRTNWGYDFALYRPVFEVIASAGLPVRGLNLPAGLARKAGREGLE 192
               +  + L  A+ W  +   DF +Y P+FE  A+  +P+ G  LP  L R +  +G  
Sbjct: 59  D--RMDAETLGAALGWAESGWPDFEMYWPIFE--AAPDVPLYGAALPRALVRGSVAKG-- 112

Query: 193 GLPPAERALIPSVVMPPSEGQRATLEEVFREHMTMREMRKPGGATSATGAASSTGMPSGT 252
              PAE                                            A + G P+  
Sbjct: 113 ---PAE------------------------------------------SFAEAGGDPARY 127

Query: 253 AATAGMPTETVQAAAPAAPEQTMPEAMRRAFDSFML-VQSVWDATMAYEAVRARIDIGGP 311
                +P E  QA   A   +   +A+       M+  Q + DA  A   ++A    G P
Sbjct: 128 GLDQPLP-EDQQAEREAMQMEAHCDALPAEMLGGMVGAQRLRDAAFADTVLQALEAHGPP 186

Query: 312 VYILAGGGHVEYGWGI 327
           V ++ G GH    WG+
Sbjct: 187 VVLITGNGHARTDWGV 202