Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 402 a.a., multidrug efflux system transmembrane protein from Sinorhizobium meliloti 1021

 Score =  242 bits (617), Expect = 2e-68
 Identities = 133/346 (38%), Positives = 203/346 (58%), Gaps = 4/346 (1%)

Query: 32  AYVPPPPPKVTVGAPHVGPVTEYMEFSGTIAAVESVDITARVTGTLRSAQFRDGSTVHKG 91
           A VPP  P V+V       +T +  FSG + A+E V+I  RV G + SA FR+G+ V KG
Sbjct: 46  AAVPPAVP-VSVAKAESRRITTWESFSGRLEAIERVEIRPRVGGAILSAHFREGALVEKG 104

Query: 92  DPLFIIEPEPYQAALQRAEAELEVQQAALARAETELARSRKLLTEKAGSETDVVKWQQQR 151
           D L  I+PEP+ AA++RAEA++   +A +A A TEL R RKL+T  A  ++ V +     
Sbjct: 105 DLLVTIDPEPFAAAVERAEAQVAAAEARVALARTELERGRKLVTTSAIPQSGVDQRLSVY 164

Query: 152 DSAKANISRAKAQIETARIDLGYTRITAPFDGQISRRFADPGNVVGPGAVTR-LATIVRR 210
           D A+AN+  AKA + TA++DL YT + AP  G++ R     GN+V  G  +  L T+V  
Sbjct: 165 DEARANLRSAKAALHTAKLDLEYTEVRAPISGRVGRLNVTAGNLVTAGTASPVLTTLVSV 224

Query: 211 DQVHVYFNINERDLLRLMAERPKPKTA--SAPTMPLELALADEDGFPHAGKLDYADPGVD 268
           D ++  FN++E  +   +A+      +  +   +P+E+  + ++G P  G +   +  VD
Sbjct: 225 DPIYASFNVSEEVVAAALAKLSASAGSIDAIERIPVEIGTSADEGTPITGHIQLINNEVD 284

Query: 269 PATGTMQLRGLFPNPSGRLLPGLFARIRVAVGQSDKAMMVPDRAIGQDQSGSYVIIVNAQ 328
            ATGT+++R    N  GRL+PG F RIR+   Q ++ +++ DRA+  DQ   +V++V A 
Sbjct: 285 AATGTIRVRAELTNADGRLIPGQFVRIRIGDPQPEEKLVISDRAVSSDQDKKFVLVVGAD 344

Query: 329 NIAEQRAVVLGPLHEGYRVVSKGLSAEDRVVVNGIQRARPGSPVDP 374
           N  E R V LGP+ +G R+V  GL   + ++VNG+QR RPG  V P
Sbjct: 345 NKVEYRQVTLGPVADGLRIVENGLKPGESIIVNGLQRVRPGVVVAP 390