Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 405 a.a., efflux transporter, RND family, MFP subunit (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  198 bits (503), Expect = 3e-55
 Identities = 128/370 (34%), Positives = 196/370 (52%), Gaps = 9/370 (2%)

Query: 10  AVHIALLALATATG--IYGCDSRNAY---VPPPPPKVTVGAPHVGPVTEYMEFSGTIAAV 64
           A+H+ LLAL  A    + GC   +A    +P P   V    P   P+T   E+ G  A  
Sbjct: 7   ALHMGLLALVLALSAVLTGCKDESAAPKAMPAPLVVVQQVQPRDLPLT--YEYVGQTAGS 64

Query: 65  ESVDITARVTGTLRSAQFRDGSTVHKGDPLFIIEPEPYQAALQRAEAELEVQQAALARAE 124
             V++ ARV G L    + +G  V KGD +F I+PEP++A L +A  +    +A L  A+
Sbjct: 65  REVEVRARVGGILLRRAYAEGRPVKKGDLMFDIDPEPFKADLDQALGQQAQAEARLQSAQ 124

Query: 125 TELARSRKLLTEKAGSETDVVKWQQQRDSAKANISRAKAQIETARIDLGYTRITAPFDGQ 184
           +   R   L  E A S+ D      + DSAKA +  A+A+++TARI+LGYTR+ AP  G 
Sbjct: 125 SNRDRVLPLYRENAVSQKDRDDAVAEFDSAKAALEEARARVKTARINLGYTRVEAPISGM 184

Query: 185 ISRRFADPGNVVGPGAV-TRLATIVRRDQVHVYFNINERDLLRLMAERPKPK-TASAPTM 242
            S+     G++V   A  + L TI + D V+V F+    DL RL   R + + T    + 
Sbjct: 185 TSKETRSEGSLVTTTAEGSLLTTISKVDPVYVNFSAPSVDLFRLRRMREEGRITLPKKSY 244

Query: 243 PLELALADEDGFPHAGKLDYADPGVDPATGTMQLRGLFPNPSGRLLPGLFARIRVAVGQS 302
            + + L D   +   G +++ DP VDP TGT+++R  FPNP   +LPG F R+ +     
Sbjct: 245 EVTVRLIDGSTYKRTGTVNFIDPLVDPLTGTIRVRAEFPNPEAEVLPGQFVRVLMTGAVY 304

Query: 303 DKAMMVPDRAIGQDQSGSYVIIVNAQNIAEQRAVVLGPLHEGYRVVSKGLSAEDRVVVNG 362
           + A+ +P RA+ Q Q G  V ++   ++A+ R V +    +   +V KGL+  +R+VV G
Sbjct: 305 NNALAIPQRAVLQTQQGPMVWVIGEGDVAQPRPVEISLPIDNQYIVEKGLAPGERIVVEG 364

Query: 363 IQRARPGSPV 372
           + + RPG PV
Sbjct: 365 LLKVRPGQPV 374