Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 391 a.a., acriflavin resistance protein AcrA from Klebsiella michiganensis M5al

 Score =  218 bits (554), Expect = 3e-61
 Identities = 125/369 (33%), Positives = 211/369 (57%), Gaps = 11/369 (2%)

Query: 24  IYGCDSRNAY-VPPPPPKVTVGAPHVGPVTEYMEFSGTIAAVESVDITARVTGTLRSAQF 82
           + GCD   A    P  P V+     V  ++++  F+G I AVESV +  RV+G +    +
Sbjct: 24  LVGCDEGVAQNAAPQAPAVSAADVVVKSISQWDSFNGRIEAVESVQLRPRVSGYIDKVNY 83

Query: 83  RDGSTVHKGDPLFIIEPEPYQAALQRAEAELEVQQAALARAETELARSRKLLTEKAGSET 142
            DG  V KG+ LF I+   Y+AAL++A+A L   +   + A +E  R+ KL+     S  
Sbjct: 84  TDGQEVKKGEVLFTIDDRTYRAALEQAQATLARAKTQASLARSEANRTDKLVNTNLVSRE 143

Query: 143 DVVKWQQQRDSA---KANISRAKAQIETARIDLGYTRITAPFDGQISRRFADPGNVVGPG 199
           +   W+Q+R +A   +A+I  A+A ++ A+++L +T++TAP DG+ SR     GN+V  G
Sbjct: 144 E---WEQRRAAATQAQADIRAAQAAVDAAQLNLDFTKVTAPIDGRASRALITSGNLVTAG 200

Query: 200 -AVTRLATIVRRDQVHVYFNINERDLLRL--MAERPKPKTASAPTMPLELALADEDGFPH 256
            + + L T+V +  V+VYF+++E   L    +A   +  +++   +P+E+ L  E+G+PH
Sbjct: 201 DSASVLTTLVSQKTVYVYFDVDESTYLHYQNLARSGQGASSNHLALPVEIGLVGEEGYPH 260

Query: 257 AGKLDYADPGVDPATGTMQLRGLFPNPSGRLLPGLFARIRVAVGQSDKAMMVPDRAIGQD 316
            GK+D+ D  + P+TGT+++R L  N   +  PGLFAR+R+       A ++ D+A+  D
Sbjct: 261 QGKVDFLDNQLTPSTGTIRMRALLDNAQRQFTPGLFARVRLPGSAEFNATLIDDKAVLTD 320

Query: 317 QSGSYVIIVNAQNIAEQRAVVLGPLHEGYRVVSKGLSAEDRVVVNGIQRA-RPGSPVDPT 375
           Q   YV +V+ +  A++R +  G L +G R+V +GL   D+V+V+G+Q+   PG PV+  
Sbjct: 321 QDRKYVYVVDKEGKAQRRDITPGRLADGLRIVQQGLKPGDKVIVDGLQKVFMPGMPVNAK 380

Query: 376 PAPDTGQPA 384
               T   A
Sbjct: 381 TVAMTASTA 389