Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 402 a.a., hemolysin D from Herbaspirillum seropedicae SmR1

 Score =  205 bits (521), Expect = 2e-57
 Identities = 130/395 (32%), Positives = 201/395 (50%), Gaps = 12/395 (3%)

Query: 6   TISRAVHIALLALATATGIYGCDSRNAYVPPPPPKVTVGAPHVGP--VTEYMEFSGTIAA 63
           ++SR   + +  +A A  +  C  + A    P P   V    + P  V    E  G + A
Sbjct: 3   SVSRFTRLTM-TVAIAAALVACGQKPAAQGGPMPPSEVSVVTIAPQRVAITNELPGRVEA 61

Query: 64  VESVDITARVTGTLRSAQFRDGSTVHKGDPLFIIEPEPYQAALQRAEAELEVQQAALARA 123
                + ARV G ++   F++GS V +G  LF I+P  Y+A+L+ A+A L   QA L + 
Sbjct: 62  FRVAQVRARVAGIVQKRVFKEGSEVKEGQVLFKIDPAQYKASLESAQATLARAQANLTQT 121

Query: 124 ETELARSRKLLTEKAGSETDVVKWQQQRDSAKANISRAKAQIETARIDLGYTRITAPFDG 183
                R + L+   A S+ +       +  A+A+++  KA ++TA ++LGY  +T+P  G
Sbjct: 122 TLTAQRYKPLVEVNAVSKQEYDNAVAAQKQAEADVAAGKAAVQTASLNLGYATVTSPISG 181

Query: 184 QISRRFADPGNVVGPGAVTRLATIVRRDQVHVYFNINERDLLRLMAERPKPKTASAPTMP 243
           +I R     G +VG G  T+LA + + D V+V    +  DLL+L       +  S     
Sbjct: 182 RIGRALVTEGALVGQGDATQLALVQQLDPVYVNVTQSSADLLKLQQAMAAGQLKSVGDNK 241

Query: 244 LELALADEDG--FPHAGKLDYADPGVDPATGTMQLRGLFPNPSGRLLPGLFARIRVAVGQ 301
             + L  E+G  +P  GKL ++D  VD  TG++ LR  FPNP   LLPG + R ++    
Sbjct: 242 ASVTLELENGQAYPLPGKLLFSDISVDENTGSVSLRAEFPNPKRLLLPGTYVRAKIEQAV 301

Query: 302 SDKAMMVPDRAIGQDQSGSYVIIVNAQNIAEQRAVVLGPLHEGYRVVSKGLSAEDRVVVN 361
            ++A++VP +A+ +D  GS V++VNA+N  E R V  G        V  GL   DRV+V 
Sbjct: 302 DEQALLVPQQAVVRDAGGSTVMVVNAENKVEPRPVKTGGARGNNWQVLDGLKEGDRVIVE 361

Query: 362 GIQRARPGSPVDP-------TPAPDTGQPAGKPAS 389
           G+Q+ RPG+ V P        PA  +GQPA + AS
Sbjct: 362 GLQKVRPGATVKPVQWNPAGAPAQASGQPAKQEAS 396