Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 403 a.a., efflux RND transporter periplasmic adaptor subunit from Dyella japonica UNC79MFTsu3.2

 Score =  216 bits (551), Expect = 7e-61
 Identities = 128/394 (32%), Positives = 210/394 (53%), Gaps = 23/394 (5%)

Query: 13  IALLALATATGIYGCDSRNAYVPPPPPKVTVGAPHVGPVTEYM--EFSGTIAAVESVDIT 70
           + LLALA       C  +    PP  P   VG     PV+  +  +  G ++A  S D+ 
Sbjct: 13  LGLLALAA------CGGKKEQGPPQMPTPEVGVVKAQPVSAPLNKDLVGRLSAFRSADVR 66

Query: 71  ARVTGTLRSAQFRDGSTVHKGDPLFIIEPEPYQAALQRAEAELEVQQAALARAETELARS 130
           ARV+G L    + +G+ V KG  LF I+P  YQA L  A+A L   QA  A A     R+
Sbjct: 67  ARVSGVLLKRVYEEGTDVKKGQVLFEIDPSIYQANLNSAQANLASAQATYANAHKAAERA 126

Query: 131 RKLLTEKAGSETDVVKWQQQRDSAKANISRAKAQIETARIDLGYTRITAPFDGQISRRFA 190
           R+L  +   S++D+   +    S+ A + +++A +E++RI LG+TR+TAP DG+  ++  
Sbjct: 127 RQLRPQGYVSQSDLDSAEASERSSAAAVKQSQAAVESSRISLGFTRVTAPIDGRAGQQQV 186

Query: 191 DPGNVVGPG------AVTRLATIVRRDQVHVYFNINERDLLRLM-AERPKPKTASAPTMP 243
             G +VG G      + T L T+ + D +++ F +   DL RL  A+     + + PT  
Sbjct: 187 TEGAIVGNGNADAGASSTLLTTVDQLDPLYINFTVGAGDLDRLRRAQSAGHVSLNDPTKT 246

Query: 244 -LELALADEDGFPHAGKLDYADPGVDPATGTMQLRGLFPNPSGRLLPGLFARIRVAVGQS 302
            +++ L D   +   G LD++   VDP TGT+ LR    NP  RLLPG +  ++  +GQ 
Sbjct: 247 TVQVVLPDGSTYDQQGTLDFSGATVDPTTGTVNLRAQLANPDKRLLPGTYVTVKANLGQQ 306

Query: 303 DKAMMVPDRAIGQDQSGSYVIIVNAQNIAEQRAVVLGPLHEGYRVVSKGLSAEDRVVVNG 362
           +   +VP + + +D +G+YV++VN +   +++ +    L  G  +V+ GL+A D+V+V+G
Sbjct: 307 NNVFLVPQQGVARDVAGAYVLVVNQEGKVQRKDITANDLSNGNWIVTGGLAAGDQVIVSG 366

Query: 363 IQRARPGSPVDPTP-------APDTGQPAGKPAS 389
           +Q  +PG+P   +P        P  G P G+PA+
Sbjct: 367 LQSVQPGAPAKASPWQPGKDAGPPNGAPGGQPAA 400