Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 423 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Cupriavidus basilensis FW507-4G11

 Score =  265 bits (676), Expect = 2e-75
 Identities = 150/382 (39%), Positives = 226/382 (59%), Gaps = 9/382 (2%)

Query: 3   RRHTISRAVHIALLALATATGIY----GCDSRNAYVPPPPPKVTVGAPHVGPVTEYMEFS 58
           RR  I+ A+ +A+L    AT I+      +++    P  P  V V A     +TE+ EFS
Sbjct: 6   RRTMIALAI-VAVLGAGLATSIFKPWHAGEAQAVPGPAAPATVDVAAALGKTITEWDEFS 64

Query: 59  GTIAAVESVDITARVTGTLRSAQFRDGSTVHKGDPLFIIEPEPYQAALQRAEAELEVQQA 118
           G + AV+ V+I ARV GT+ +  FR+G+ V KGDPLF I+P PY A + RAEA L   Q 
Sbjct: 65  GRLEAVDRVEIRARVGGTIDAVHFREGALVKKGDPLFTIDPRPYAAEVARAEAALAAAQV 124

Query: 119 ALARAETELARSRKLLTEKAGSETDVVKWQQQRDSAKANISRAKAQIETARIDLGYTRIT 178
               A+TELAR+++L+ + A S  +  +       A AN+  A+A ++ AR++L YTRIT
Sbjct: 125 RAGHAQTELARAQRLVQDNAVSRREFDERDNGSREAIANVRAAQASLDVARLNLTYTRIT 184

Query: 179 APFDGQISRRFADPGNVVGPGAVTR-LATIVRRDQVHVYFNINERDLLRLMAERPKPKT- 236
           AP  G++SR     GN+V  GA T  L T+V    V+  F ++E+  LR  A++    + 
Sbjct: 185 APVSGRVSRAEITVGNLVAAGAGTPVLTTVVSVSPVYASFELDEQTYLRYTADKASGASG 244

Query: 237 --ASAPTMPLELALADEDGFPHAGKLDYADPGVDPATGTMQLRGLFPNPSGRLLPGLFAR 294
                  +P+ L LA+++ +P  G +   D  +D  +GT+++R +F NP GRLLPGL+AR
Sbjct: 245 GEGGQSKLPVFLGLANDEDYPREGHIQSLDNRLDTKSGTIRVRAVFDNPDGRLLPGLYAR 304

Query: 295 IRVAVGQSDKAMMVPDRAIGQDQSGSYVIIVNAQNIAEQRAVVLGPLHEGYRVVSKGLSA 354
           I++  G     +++ DRAIG DQ   +V++++  N    R V LGP +EG RV+ +GL A
Sbjct: 305 IKLGGGSPHPVVLINDRAIGTDQGKKFVLVLDGANKLAYREVTLGPSYEGLRVIRQGLKA 364

Query: 355 EDRVVVNGIQRARPGSPVDPTP 376
           ++++VVNG+QR RPG  V P P
Sbjct: 365 DEKIVVNGLQRVRPGITVAPKP 386