Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 320 a.a., RND transporter from Burkholderia phytofirmans PsJN

 Score =  200 bits (509), Expect = 4e-56
 Identities = 119/337 (35%), Positives = 180/337 (53%), Gaps = 20/337 (5%)

Query: 46  PHVGPVTEYMEFSGTIAAVESVDITARVTGTLRSAQFRDGSTVHKGDPLFIIEPEPYQAA 105
           P    V E ++ SGT+A   +V + ARV G L+   F DG+ V +G  LF IEP+ Y+A 
Sbjct: 3   PQPREVREQLDLSGTVAPSATVTLVARVQGVLKEIGFSDGANVKQGQLLFRIEPDTYRA- 61

Query: 106 LQRAEAELEVQQAALARAETELARSRKLLTEKAGSETDVVKWQQQRDSAKANISRAKAQI 165
                 +L   QA L  AE EL R ++L  + A SE+ + K Q  RD       +A A+ 
Sbjct: 62  ------QLTYDQAELVNAEQELTRQKQLTADNATSESSLQKAQTTRD-------QALAKR 108

Query: 166 ETARIDLGYTRITAPFDGQISRRFADPGNVVGPGAVTRLATIVRRDQVHVYFNINERDLL 225
           + +RI+LGYT I APF G+I  R  D GN+VG    T+LAT+ R   V+V F +NERD  
Sbjct: 109 DMSRINLGYTEIRAPFSGRIGARSFDVGNLVGASDSTKLATLDRIQPVYVNFTLNERDAN 168

Query: 226 RLMAERPKPKTASAPTMPLELALADEDGFPHAGKLDYADPGVDPATGTMQLRGLFPNPSG 285
           R+      P+T     +       ++        L++ D  VD ++G ++LR    N   
Sbjct: 169 RIGLFTKPPRTVRVNVLGAPAGKGED------AALEFVDTRVDSSSGAIRLRADIANKDA 222

Query: 286 RLLPGLFARIRVAVGQSDKAMMVPDRAIGQDQSGSYVIIVNAQNIAEQRAVVLGPLHEGY 345
            L+PG+   + +  G     ++VPD A+ ++Q+G++V++VN+ ++ E+RAVV G L    
Sbjct: 223 HLIPGMSVEVHIPAGAPQNVLLVPDTALLREQAGAFVLVVNSASVIEKRAVVTGGLFGSL 282

Query: 346 RVVSKGLSAEDRVVVNGIQRARPGSPVDPTPAPDTGQ 382
           R ++ GL+A D+VV  G     PG+ V    A   GQ
Sbjct: 283 RAITSGLNAGDQVVTGGALAVAPGTKVQVAAAGMQGQ 319