Pairwise Alignments

Query, 389 a.a., efflux transporter, RND family, MFP subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 424 a.a., MexE family multidrug efflux RND transporter periplasmic adaptor subunit from Burkholderia phytofirmans PsJN

 Score =  252 bits (643), Expect = 2e-71
 Identities = 142/387 (36%), Positives = 221/387 (57%), Gaps = 13/387 (3%)

Query: 9   RAVHIALLALATATGI--YGCDSRNAYVPPPP---PKVTVGAPHVGPVTEYMEFSGTIAA 63
           R V IA LA+    G+  +G    +A  P  P   P+V V       +T++  +SG + A
Sbjct: 9   RRVAIAALAVIVVAGLGTFGAIRVDASSPAAPTIVPEVDVATVVQKTITDWQSYSGRLEA 68

Query: 64  VESVDITARVTGTLRSAQFRDGSTVHKGDPLFIIEPEPYQAALQRAEAELEVQQAALARA 123
           VE VD+ ++V GT+ S  F+DG+ V KGD LF+I+P PY A + RAEA+L   QA     
Sbjct: 69  VEKVDVRSQVPGTIVSVNFKDGALVKKGDTLFVIDPRPYAAEVDRAEAQLAAAQARTGYT 128

Query: 124 ETELARSRKLLTEKAGSETDVVKWQQQRDSAKANISRAKAQIETARIDLGYTRITAPFDG 183
           +++  R+++L+ + A ++ D  + Q     A AN+  A+A +ETARI+LGYT+I AP  G
Sbjct: 129 QSDWERAQRLIADNAIAKRDYDEKQNAAREASANLKAAQAALETARINLGYTKIVAPVSG 188

Query: 184 QISRRFADPGNVVGPGAVTR-LATIVRRDQVHVYFNINERDLLRLMAERPKPKTASAPTM 242
           ++SR     GNV+  GA    L T+V    ++  F+ +E+  L+ ++     +      +
Sbjct: 189 RVSRAEITVGNVISAGATAAPLTTLVSVSPIYASFDADEQTYLQYLS-----RAKDGSKV 243

Query: 243 PLELALADEDGFPHAGKLDYADPGVDPATGTMQLRGLFPNPSGRLLPGLFARIRVAVGQS 302
           P+EL LADE G+  +G ++  D  +D ++GT+++R  F N  G L+PGL+AR++V   + 
Sbjct: 244 PVELGLADETGYSRSGVIESVDNRLDTSSGTIRVRARFDNQDGALIPGLYARVKVGGSEP 303

Query: 303 DKAMMVPDRAIGQDQSGSYVIIVNAQNIAEQRAVVLGPLHEGYRVVSKGLSAEDRVVVNG 362
             A+++ D A+G DQ   +V++V+  N    R++ +G +    RVV  GL A DR+VVNG
Sbjct: 304 HPALLIDDAAVGTDQDKKFVLVVDQNNHVAYRSIDVGGMQGNLRVVKGGLKATDRIVVNG 363

Query: 363 IQRARPGSPVDPTPAPDT--GQPAGKP 387
           IQR RPG  V     P T  G P   P
Sbjct: 364 IQRVRPGDAVRAHMVPMTTDGDPNSAP 390