Pairwise Alignments

Query, 541 a.a., RND efflux system, outer membrane protein, NodT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 474 a.a., RND efflux system, outer membrane lipoprotein CmeC from Xanthomonas campestris pv. campestris strain 8004

 Score =  263 bits (672), Expect = 1e-74
 Identities = 174/474 (36%), Positives = 260/474 (54%), Gaps = 17/474 (3%)

Query: 24  LLRACLTPVLLLTLLTACAKVGPDFSAPGGDVPDVWQDASHPVASSDADVDGTWWNTFND 83
           ++R  L   L   +L+ CA VGPD+  P        Q A     S+++ V G WW+ F+D
Sbjct: 1   MVRTLLGAALAAAILSGCA-VGPDYR-PEPPAAVTLQGAQDAAYSAESPV-GNWWSQFDD 57

Query: 84  PVLDSLVTEARSANLSLHLAALRVFEARARLGAAVGNLYPQ-TQQGTGGLTWTHPSDRAP 142
           PVL+ LV +A  AN  L +A  RV +ARA       +  P  T QG+         DR  
Sbjct: 58  PVLEQLVRDALFANHDLRIAVSRVKQARAVFVERRLDQAPHITAQGS--------FDRRE 109

Query: 143 TAPQPTTGRDNPDYVQTSAGLDVAWELDFWGKFRRGIEAADADLRASMADHQTALVSVSA 202
              Q   G       QT+ GLD AWELD +G+ RR  EAA ADL A  A  Q   V+V+A
Sbjct: 110 QQ-QVIAGNQRFLTEQTTLGLDAAWELDLFGRQRRASEAARADLEAEQAGLQDVQVTVAA 168

Query: 203 EVARSYILYRTVQKQLAIAETNVAIQRESLRIATARFNYGATSERDMRQALSLLRDTEAR 262
           EVAR+Y   R  QKQL +++  +   R++ ++   R++ GA SE D++ +L+ L+  EA 
Sbjct: 169 EVARNYFELRGTQKQLDVSKRTLTNLRDTQKLTQTRWDLGAGSELDVQSSLARLKAIEAD 228

Query: 263 IPNLAHSLRETRNALCVLLGKAPQDISARLGDAPIPTAPTHVAVGIPADLLRRRPDVHKA 322
           IP L  +  + R+ + VLLG+ P  + A L     P     + +G  A LLR+RPDV  A
Sbjct: 229 IPLLETAEAQYRHRIAVLLGQQPNALDATLVARTAPPFARALPLGDTASLLRQRPDVRTA 288

Query: 323 LATAAGQCARLGVAKADFYPAFTLGGFVGFTASNVGAFGLGDTFSNGFTAYGGPGLSLPL 382
               A   A++GVA AD +P  ++ GFVGF + +      G+  +   T    P +S   
Sbjct: 289 ERRLAAATAQVGVATADLFPRISVSGFVGFLSGDAARLTQGNAKAWSIT----PSISWAA 344

Query: 383 FNYGRIVSNVRAQDARFQQSLTSYRETVLVALRETEDAIDRFIQAQGRTALLTESASDAA 442
           F++G + + +RA  A+ + +L  Y++TVL+AL +TE+A+  + + Q R A++ + A+ A 
Sbjct: 345 FDFGTVRARLRASKAQAEGALAQYQQTVLLALEDTENALTGYGRQQARLAIVVDQANAAR 404

Query: 443 RSMQLALIQYQEGSTDFTTVLTAARDLATREDALAAAKGEICQSLVAMFKALGG 496
           R+ QLA I+Y+EGS DF T+L A R     +DALA A+  +   +V ++KALGG
Sbjct: 405 RAEQLAQIRYREGSEDFLTLLDAQRTQLAADDALAQAEAAVNVGVVGVYKALGG 458