Pairwise Alignments

Query, 541 a.a., RND efflux system, outer membrane protein, NodT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 516 a.a., efflux transporter outer membrane subunit from Ralstonia sp. UNC404CL21Col

 Score =  225 bits (574), Expect = 3e-63
 Identities = 155/500 (31%), Positives = 242/500 (48%), Gaps = 29/500 (5%)

Query: 30  TPVLLLT-LLTACAKVGPDFSAPGGDVPDVWQDASHPVASSDADV--------------- 73
           TP+ L   L  A   + P +  P    P+ +++A+ P  ++DA +               
Sbjct: 19  TPLALAAALFLAACSLAPTYEKPDVGTPNAFKEAAQPAQATDAPLAANEQGKWKTAEPAL 78

Query: 74  --DGTWWNTFNDPVLDSLVTEARSANLSLHLAALRVFEARARLGAAVGNLYPQTQQGTGG 131
             DG WW  FNDP LD L  +A  A+ +L  AA RV +ARA + A   +L+P+   G G 
Sbjct: 79  PADGAWWKIFNDPTLDKLEAQAAEASPTLAAAAARVTQARAFVQANRASLFPELDVGFGP 138

Query: 132 LTWTHPSDRAPTAPQPTTGRDNPDYVQTSAGLDVAWELDFWGKFRRGIEAADADLRASMA 191
              T     A +A  P      P      A   VA+E+D +G+ R  I+AA AD     A
Sbjct: 139 ---TRQRASAASAGLPVGAPVQPQ-TYWRAQSTVAYEVDLFGRVRNNIDAAGADAERVEA 194

Query: 192 DHQTALVSVSAEVARSYILYRTVQKQLAIAETNVAIQRESLRIATARFNYGATSERDMRQ 251
            ++ A +S+ A+VA++Y   RT+  + A+    +  + E+L++   RFN G   E D+ +
Sbjct: 195 LYRAARLSLQADVAQTYFSLRTLDAEEALLSRTLVGREEALKLVQRRFNTGDIGELDVAR 254

Query: 252 ALSLLRDTEARIPNLAHSLRETRNALCVLLGKAPQDISARLGDAPIPTAPTHVAVGIPAD 311
           A + L    +    +        +AL  LLGKAP D +  +   P+ T    V  G+P+ 
Sbjct: 255 ADAELATARSDRIGVQRRRAVLEHALATLLGKAPADFN--MDAQPLTTLDVRVPAGLPSA 312

Query: 312 LLRRRPDVHKALATAAGQCARLGVAKADFYPAFTLGGFVGFTASNVGAFGLGDTFSNGFT 371
           LL RRPDV  A  + A   AR+GVA+A F+P   L G  G+ + ++G      + +    
Sbjct: 313 LLERRPDVAAAERSMAAANARIGVARAAFFPQLQLTGGFGYESHDIGDLLKWGSRTWILG 372

Query: 372 AYGGPGLSLPLFNYGRIVSNVRAQDARFQQSLTSYRETVLVALRETEDAIDRFIQAQGRT 431
              G  LSLP+F+ G   + V+   A +++++ +YRE+VLVA RE ED +        + 
Sbjct: 373 PLVGTALSLPIFDGGARSAGVKQARAAYEENVANYRESVLVAFREVEDNLSELRLLADQA 432

Query: 432 ALLTESASDAARSMQLALIQYQEGSTDFTTVLTAARDLATREDALAAAKGEICQSLVAMF 491
               ++   + R+ QL+  +Y  GS ++  V+ A R++ + E       G    S V + 
Sbjct: 433 KAQDDAVRASTRAAQLSRTRYNAGSVNYLDVIDAERNMLSAERIGVQLAGSRVNSTVGLI 492

Query: 492 KALGGGWHKLPGDVFIPVNA 511
           KALGGGW  LP     P NA
Sbjct: 493 KALGGGWGDLP-----PANA 507