Pairwise Alignments

Query, 77 a.a., DNA-directed RNA polymerase, omega subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 92 a.a., DNA-directed RNA polymerase subunit omega (RefSeq) from Shewanella amazonensis SB2B

 Score = 49.3 bits (116), Expect = 8e-12
 Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 2/59 (3%)

Query: 1  MARITVEDCQKRIDNRFLLVQMAIKRVQQYR-EGYEPLVDSKN-KEVVTALREIAAGKV 57
          MAR+TVED  K+I NRF ++ +A +R +Q   +G +P+V+ +N K  V ALREI  G V
Sbjct: 1  MARVTVEDAVKQIGNRFDMILVAARRARQIAVQGKDPMVEEQNDKPTVIALREIEKGLV 59