Pairwise Alignments

Query, 77 a.a., DNA-directed RNA polymerase, omega subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 93 a.a., DNA-directed RNA polymerase subunit omega (RefSeq) from Shewanella loihica PV-4

 Score = 48.5 bits (114), Expect = 1e-11
 Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 2/64 (3%)

Query: 1  MARITVEDCQKRIDNRFLLVQMAIKRVQQYR-EGYEPLVDSKN-KEVVTALREIAAGKVM 58
          MAR+TVED   +I NRF ++ +A +R +Q   +G +P+V+ +N K  V ALREI  G V 
Sbjct: 1  MARVTVEDAVNQIGNRFDMILVAARRARQIAVQGKDPMVEEENDKPTVIALREIELGLVT 60

Query: 59 PEDL 62
           + L
Sbjct: 61 ADTL 64