Pairwise Alignments

Query, 77 a.a., DNA-directed RNA polymerase, omega subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 114 a.a., DNA-directed RNA polymerase subunit omega (EC 2.7.7.6) from Sphingomonas koreensis DSMZ 15582

 Score = 52.8 bits (125), Expect = 9e-13
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 1/63 (1%)

Query: 1  MARITVEDCQKRIDNRFLLVQMAIKRVQQYREGYE-PLVDSKNKEVVTALREIAAGKVMP 59
          MAR+TVEDC  ++ NRF LV +A +R +Q   G E  L   ++K  V ALREIA   V P
Sbjct: 1  MARVTVEDCVDKVSNRFDLVLLAAQRARQISGGAELTLERDRDKNPVVALREIAEETVRP 60

Query: 60 EDL 62
          ++L
Sbjct: 61 DNL 63