Pairwise Alignments

Query, 248 a.a., conserved hypothetical protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 317 a.a., PP-loop domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 74.3 bits (181), Expect = 3e-18
 Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 7/226 (3%)

Query: 15  KSAGKTMQHTGMLYPGARIGVAVSGGMDSWVLLQVLRIRQRIVPFPFEIMALHVN---PG 71
           +  G  +    M+  G  +   +SGG DS+ +L +L    +  P  F ++A++++   PG
Sbjct: 23  REVGSAIADYNMIEEGDTVMCCLSGGKDSYAMLDILVNLLQRAPVNFNLVAVNLDQKQPG 82

Query: 72  FDPENHAPLLPWLERNGVAAHIEVTDHGPRAHSPENRRNSACFYCAWLRRKRLFELCAQY 131
           F PE+  P   +L+   V  HI   D             + C  C+ LRR  L+    + 
Sbjct: 83  F-PEDILPA--YLDSLKVPYHILEKDTYSIVKDKIPEGKTTCSLCSRLRRGTLYGFAQKI 139

Query: 132 RLSHLAFGHNADDLVGTFLMNLYQNGRVDGMSMKEAFFGGRLQVIRPLLMVEKSDIARAV 191
             + +A GH+ DD++ T  +N++  G++  M  K     G   VIRPL    + DIA   
Sbjct: 140 GATKIALGHHRDDIIETMFLNMFYAGKLKAMPPKLLSDDGANVVIRPLAYSREKDIAEYA 199

Query: 192 RQWGLPVW-SNPCPSAGATRRSEVMDDFQRLCRENKGMKRNVFNGL 236
                P+   N C S    +R+ V +  +   ++  G    +F  +
Sbjct: 200 ELKAFPIIPCNLCGSQENLKRAAVKEMLKSWDKQFPGRIETIFTAM 245