Pairwise Alignments

Query, 459 a.a., sigma-54 dependent transcriptional regulator/response regulator (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 465 a.a., Fis family transcriptional regulator from Pseudomonas fluorescens FW300-N2E3

 Score =  377 bits (969), Expect = e-109
 Identities = 209/460 (45%), Positives = 282/460 (61%), Gaps = 10/460 (2%)

Query: 4   TTHILVIDDEKNYLLVLEALLTDAGYAVTALNDPETALAFLEESEVDVVITDMKMPRVTG 63
           T +ILV+DDE     +L + L+     V   ++   AL  LE+ ++D+VI+D +MP + G
Sbjct: 2   THNILVVDDEPKLCDLLASALSQNDIQVFTASNGLHALKVLEQEDIDLVISDWRMPGMDG 61

Query: 64  REVLERVKKTWPHIPVCIMTAFGSIEGAVDVMKYGAFDYITKPFSNDELLLSVQNAAELS 123
            ++L  +K  +P +PV +MTA+ +++ AV  M+ GAFDYI KPF  DEL ++V  A +  
Sbjct: 62  PQLLAEIKVRYPQLPVIVMTAYSTVKNAVQSMRNGAFDYIAKPFDIDELDITVNKALQFR 121

Query: 124 RVHRQYRALRANLEERYGTHQIIGRSKAIREVLDMVDRAAPSRSTVLITGESGTGKELVA 183
            + +  + +RA LEE      ++G S   R VL  VD    S +T+L+TGESGTGKE+VA
Sbjct: 122 DILKDNQRMRAELEEHQQIDSLVGDSPTFRRVLQAVDSVRESNATILLTGESGTGKEMVA 181

Query: 184 RAIHFSSPRNSGPFVSVNCMALNPGVLESELFGHEKGSFTGAMAMRRGRFEQADGGTLFL 243
           RAIH    R   PFV+VNC A+  G+LESE+FGH KG+FTGA+A R GRF QAD GTLFL
Sbjct: 182 RAIHKHGNRADKPFVAVNCAAIPEGLLESEMFGHRKGAFTGAVADRVGRFMQADKGTLFL 241

Query: 244 DEIGELTPELQVKLLRVLQERRFERVGGGDEIEVDIRVVAATNKDLQKEVENGTFREDLY 303
           DE+G++   LQ K+LR LQER  E VG   E +VD+RV+AATNK+L + V N  FREDLY
Sbjct: 242 DEVGDMPLALQAKILRALQERVIEPVGDPRERKVDVRVIAATNKNLLEAVANKEFREDLY 301

Query: 304 YRLNVVHVALPPLRERREDIPLLVGHFVEKLARDNGMKPKTFTPEAHDYLTGYEWPGNIR 363
           YRLNV  + LP LRER EDI  L  HF   L    G +   F+PEA   +  Y WPGNIR
Sbjct: 302 YRLNVFPIPLPALRERVEDIAPLARHFAHTLGATAGKRITGFSPEALQAMANYSWPGNIR 361

Query: 364 QLQNVVERCLVLVASDTVGVDDLP-------PEIRDEESQLKSAVDLLPVRLDLADTLEK 416
           +LQN VER  ++ +   +  DDLP       P +      L     + P   DL   L +
Sbjct: 362 ELQNCVERATIVASGSVIEEDDLPAYLFASRPTVDGTRVPLNVGTGVPP---DLDAALVE 418

Query: 417 IEAALIRRALVRAEFVQVKAAELLGISKSLLQYKLKKYGI 456
           +E + I  AL ++  VQ  AA+L+GIS+    Y+LKK GI
Sbjct: 419 VEKSYILAALQQSNGVQAAAAQLIGISERSFWYRLKKLGI 458