Pairwise Alignments

Query, 616 a.a., DNA polymerase III, gamma and tau subunits, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 563 a.a., DNA polymerase III subunit gamma/tau from Dyella japonica UNC79MFTsu3.2

 Score =  291 bits (744), Expect = 7e-83
 Identities = 213/620 (34%), Positives = 291/620 (46%), Gaps = 92/620 (14%)

Query: 1   MSHASLTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAK 60
           MS+  L  ++RP+ FAE+ GQE V   L+ A    R+  AYLF+GTRGVGKTTIARIFAK
Sbjct: 1   MSYQVLARKWRPRKFAELVGQEHVVRALTNALDTGRMHHAYLFTGTRGVGKTTIARIFAK 60

Query: 61  ALNCTTAPTGEPCNTCEQCRKVTQGMHVDVVEIDGASNRGIDDAKRLKEAIGYAPMEGRY 120
           +LNC    + +PC  C  C  V  G  VD++EID ASN G+DD + + E   YAP  GR+
Sbjct: 61  SLNCERGESADPCGECAVCTAVDAGRFVDLLEIDAASNTGVDDVREVIENAQYAPARGRF 120

Query: 121 KVFIIDEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTFTRLSE 180
           KV+++DE HML++ AFNALLKTLEEPP  V F+LATT+P K PVT++SRC  F   RL  
Sbjct: 121 KVYLVDEVHMLSKPAFNALLKTLEEPPPHVKFLLATTDPQKLPVTVLSRCLKFNLKRLLP 180

Query: 181 AGLEAHLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARGV 240
             +   +  +LG E + Y+  A+  +AR A GS+RD +SLL Q +A G   L +D  R +
Sbjct: 181 EQISGQMRHILGAESIAYEDGAIVELARAADGSLRDGLSLLDQAIAYGGGALKVDDVRAM 240

Query: 241 LGLAGQELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQA-- 298
           LG   +   L +++ALAA D   +      +     D G  L +L A    L + +    
Sbjct: 241 LGSVARGQVLGVLDALAAGDGDQLMAECARIASFSPDFGGVLDDLAAVLHRLQLFQLVPG 300

Query: 299 --------GEAALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRVLTSLEPAM 350
                    EAALA+L             A+R  P  +   +Q+ + G+R +  + +   
Sbjct: 301 YRPEGDGGDEAALAAL-------------AERLGPEDVQLYYQIAIGGRRDLALAPDART 347

Query: 351 ALELLLLNLAMLPRLMPVESLRPSGGGASAPSGSAAEGPASGGAATIPTPGTQGMQGTAP 410
             E+ LL +          + RP+G G      + AE PA+                  P
Sbjct: 348 GFEMALLRML---------AFRPAGEGEP----TRAERPAAA---------------PRP 379

Query: 411 AAGMTPSPAAPATPAPSAAPSPRVPWDDAAPAPRQTGIPPRPAPRMP---EASPTAGSPA 467
           AA   P+PA  A P P++A           PAP      PR A  +P   E +P     A
Sbjct: 380 AAAPAPAPARSAPPMPASA-----------PAPAMERPAPRQAETLPPRMEPAPVPAPRA 428

Query: 468 APAQGDDSDTAEHTPSGPRTWDGFLEFCQGRNGQGGRLA--TVLRQTTPEHDDGILRLA- 524
           APA   DS    H       WD  +E    R G  G+LA   VLR    E +   L LA 
Sbjct: 429 APAL--DSRGLPH-------WDSLIEQASLR-GPMGQLAQNAVLR----EREGSTLVLAL 474

Query: 525 ----------TMSSVQYERLTDAATRTTLAGLVRDYFGDACRVEVNPPTRVRRTEAELRK 574
                      M     ER++ A         V D  G                ++   +
Sbjct: 475 QPMYMHLAVEPMVGQMEERISQALGERIRLRFVDDRSGGGETPAARAANARSVAQSAAEQ 534

Query: 575 EAEAHPAVQLLKEEMGACIL 594
             E  P VQ L+ E GA +L
Sbjct: 535 SIEEDPLVQSLRREFGARVL 554