Pairwise Alignments

Query, 616 a.a., DNA polymerase III, gamma and tau subunits, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 587 a.a., DNA polymerase III, subunits gamma and tau (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  271 bits (692), Expect = 7e-77
 Identities = 164/431 (38%), Positives = 224/431 (51%), Gaps = 8/431 (1%)

Query: 6   LTARYRPQTFAEVAGQETVKAILSRAAQENRVAPAYLFSGTRGVGKTTIARIFAKALNCT 65
           L  +YRP TFA++ GQ+ +   L  A Q +R+A A++ +G RG GKTT ARI AK +NCT
Sbjct: 12  LARKYRPATFADLIGQDAMVRTLRNAFQADRIAQAFMMTGIRGTGKTTTARIIAKGMNCT 71

Query: 66  TA-----PTGEPCNTCEQCRKVTQGMHVDVVEIDGASNRGIDDAK-RLKEAIGYAPMEGR 119
            A     PT +PC  C+ CR +  G HVDV+E+DGAS   IDD +  + +++ YAP   R
Sbjct: 72  GADGAGGPTTDPCGQCDNCRGIMAGQHVDVIEMDGASQTKIDDIRANVLDSVYYAPASAR 131

Query: 120 YKVFIIDEAHMLTREAFNALLKTLEEPPARVTFVLATTEPHKFPVTIVSRCQHFTFTRLS 179
           YK+FIIDE HML+  AFNALLKTLEEPPA V F+ ATTE  K PVT++SRCQ F   R+ 
Sbjct: 132 YKIFIIDEVHMLSTSAFNALLKTLEEPPAHVKFIFATTEIRKVPVTVLSRCQRFDLRRIE 191

Query: 180 EAGLEAHLTKVLGREGVDYDPAAVRLIARRAAGSVRDSMSLLGQVLALGESRLTIDGARG 239
              + AHL ++ G E  +    A+ LI R A GSVRD+MSLL Q ++ G    T +  R 
Sbjct: 192 PEVMIAHLRRIAGLERAEITDDALALITRAAEGSVRDAMSLLDQAISHGAGETTAEQVRA 251

Query: 240 VLGLAGQELFLRLMEALAAQDCLGVANVVRELLDRGVDMGFFLRELVATWRNLFMLRQAG 299
           +LGLA +   + L + +   D  G    +      G D    LR+L      + +++   
Sbjct: 252 MLGLADRGRVMDLFDLVMRGDAAGALTELSAQYSDGADPMAVLRDLAEVTHWVSVIKITP 311

Query: 300 EAALASLDLPEDEARQWLGWAKRFEPAHIHACWQMTLEGQRRVLTSLEPAMALELLLLNL 359
           +AA      P++ AR     A       +   WQM L+    V  S    MA E+ ++ L
Sbjct: 312 DAAEDPTVSPDERARGQAA-AAELPMRALTRMWQMLLKALEEVAISPNAMMAAEMAIIRL 370

Query: 360 AMLPRLMPVESLRPSGGGASAPSGSAAEGPASGGAATIPTPGTQGMQGTAPAAGMTPSPA 419
             +  L   E L       + P  +   G A GG  T  +    G    AP  G   + A
Sbjct: 371 THVADLPSPEDLVRKLQTMTPPPATPGGGAAPGGPGTGVSARGHG-AAPAPRGGGVRASA 429

Query: 420 APATPAPSAAP 430
            PA     A P
Sbjct: 430 GPALAMAQADP 440