Pairwise Alignments

Query, 402 a.a., rubredoxin-oxygen oxidoreductase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 244 a.a., uncharacterized flavoprotein (RefSeq) from Shewanella amazonensis SB2B

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 10/211 (4%)

Query: 36  NAYVVKD-EKTVLFDTVKHDFTDTMLCRLSRVVEPCKIDYIVCNHLEPDHAGALPELIAR 94
           N Y+V+   +++L D    +    ML  L R +   ++ Y+  +H +PD   +L  L  +
Sbjct: 31  NQYLVQSGNQSLLMDPGGIELFAPMLASLVRHIPLEQLTYLFASHQDPDIISSLG-LWDQ 89

Query: 95  CKPEKIFCSPMGLKAMEAHFDTTGWPVEVVKT-GDSISIGKRTIHFVETRMLHWPDSMVS 153
             P+    +P   +    HF       E +K  G  + +G+  + FV    LH   +   
Sbjct: 90  TLPKAKLYAPWLWEGFIRHFGMNNISYEPIKDKGGKLQVGEVELQFVPAHYLHASGNFHV 149

Query: 154 YIPEDKLLICNDAFGQNIASTERYADE-IDRSALFHAMKEYYHNIVLPFSPIVLKTLAQI 212
           Y P  K+L+  D  G  +   E  AD  +D  A   +  EY+H   +P +      +A++
Sbjct: 150 YDPVAKVLMSGDV-GAALEPAE--ADIFVDDFASHISKMEYFHRRWMPSNRAKSNWVARM 206

Query: 213 EQLGLDIDMLAPDHGLIFRGYDDVKYALDTY 243
             L  DI  + P HG IF+G   VK  LD +
Sbjct: 207 RDL--DIQYMCPQHGRIFKG-PQVKAFLDWF 234