Pairwise Alignments

Query, 833 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 468 a.a., diguanylate cyclase (GGDEF) domain from Pseudomonas stutzeri RCH2

 Score =  105 bits (261), Expect = 8e-27
 Identities = 67/171 (39%), Positives = 93/171 (54%), Gaps = 5/171 (2%)

Query: 662 LSTIRRLEDKIRQQAMNDGLTGLFNHSHFHLILEREMERSRRTGRGLGLIFFDLDRFKRI 721
           +  +RRL ++++ ++  D LTGL N S         +E++RR  R L ++  D+D FKRI
Sbjct: 289 IGRLRRLNEQLQIKSQTDSLTGLANRSALDGRFAVALEQARRYHRPLSIVMLDIDHFKRI 348

Query: 722 NDTYGHQAGDTILRRVAAALASVTRKGMDFPCRYGGDEFAVVTTEIEAEALQRLAMRIRN 781
           ND +GHQ GD +LR +A  L S  R G D   R+GG+EF V+  E      +  A RI  
Sbjct: 349 NDEFGHQMGDRVLREIAGLLQSCLR-GTDAVGRWGGEEFLVLCPETNGLQAEVFAERICE 407

Query: 782 TVVE---SCRNAIDLSMGLAMLKPEDTIESFVARTDRASYRAKNQPGGDRL 829
            V     S      LS G+A L P DT +S + R D A YRAK + G DR+
Sbjct: 408 QVRAFPFSTGQRQSLSAGVAELIPADTTDSLLRRADAALYRAK-RGGRDRV 457