Pairwise Alignments

Query, 833 a.a., GGDEF domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 455 a.a., response regulator PleD from Sinorhizobium meliloti 1021

 Score =  109 bits (272), Expect = 4e-28
 Identities = 71/205 (34%), Positives = 112/205 (54%), Gaps = 26/205 (12%)

Query: 636 GLYELVLTPLEARDDQGRSWLVVGRDLSTIRR--LEDKIR-------QQAMNDGLTGLFN 686
           G+ + ++ P++  +       +V R L+ IRR    D++R       + A+ D LTGL N
Sbjct: 248 GVTDYIMRPVDPNE-------LVARSLTQIRRKHCNDRLRASVQQTIELAVTDDLTGLHN 300

Query: 687 HSHFHLILEREMERSRRTGRGLGLIFFDLDRFKRINDTYGHQAGDTILRRVAAALASVTR 746
             +    L+  ++R+   GR L +   D+DRFKR+NDT+GH AGD +LR  A  + +  R
Sbjct: 301 RRYLENHLKLLIDRATTRGRPLSICITDIDRFKRVNDTHGHDAGDDVLREFANRVRATVR 360

Query: 747 KGMDFPCRYGGDEFAVV----TTEIEAEALQRLAMRIRNTVVESCRNA----IDLSMGLA 798
            G D  CR+GG+EF VV    T E+ A   +RL + + +   +  + A    +  S+G+A
Sbjct: 361 -GADLACRFGGEEFVVVMPDTTPEMAAIVAERLRLAVESRGFDIPQAATVLNVTASLGIA 419

Query: 799 MLKPE-DTIESFVARTDRASYRAKN 822
            L+P  DT E+ + R D A Y+AKN
Sbjct: 420 TLRPHGDTAEALLKRADMALYQAKN 444