Pairwise Alignments

Query, 277 a.a., ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 278 a.a., carbohydrate ABC transporter permease from Rhodopseudomonas palustris CGA009

 Score =  155 bits (393), Expect = 7e-43
 Identities = 85/257 (33%), Positives = 139/257 (54%), Gaps = 4/257 (1%)

Query: 25  AIMWALPLLYAIWTAFHP--SAYSTRFTL--NAPLTLENFVTAWHAAPFALYFVNTVLLV 80
           A++   P ++ + TA  P    YS+   L  +     EN   A+  A    + +N V++ 
Sbjct: 22  AVLMLAPFVWMLSTASKPPEEIYSSDLHLIPHHFALWENLRIAFGKADLGRFLLNGVIVT 81

Query: 81  TMVLAAQLVLCTLAAYAFAKYDFRGKNIMFALVLMQLMIMPDVLVVENYRTMASIGVLDS 140
             +   Q+++   AAYA AK  F G+  +FALVL  ++I P    +  +  +  +G LDS
Sbjct: 82  VAIFTCQVLIALPAAYALAKLRFVGRKALFALVLFGILIPPQATAIPVFLLLHQLGALDS 141

Query: 141 TLAIGLPYMASAFGIFLLRQTFKSIPKELDEAAAVEGASTLQILWKVYVPLGKPVYLAYA 200
             A+ LP+  S FGIFL+RQ F ++P +L +AA ++G S   I+W+V +P   P   A+ 
Sbjct: 142 YAALVLPFTISVFGIFLMRQFFMTVPDDLLDAARMDGMSEFAIVWRVMLPTAIPAVTAFG 201

Query: 201 LVSISYHWNNFLWPLIVTNTTNSRPLTVGLQVFSSTEQGVDWAIITAATLMTSGPLLVAF 260
           + S+  HWN++ WPLIV N+       + +  F + E G  +  + AA ++   PL+VAF
Sbjct: 202 IFSVVAHWNDYFWPLIVLNSQQYYTPPLAVAHFRNAEAGTSYGPLMAAAIVIITPLVVAF 261

Query: 261 LLFQRQFVQSFMRAGIK 277
           LL QR+F++     G+K
Sbjct: 262 LLAQRRFIEGITLTGLK 278