Pairwise Alignments

Query, 963 a.a., methyl-accepting chemotaxis protein DcrH (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 672 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

 Score =  153 bits (386), Expect = 4e-41
 Identities = 114/398 (28%), Positives = 196/398 (49%), Gaps = 49/398 (12%)

Query: 399 DIDEALLAASKITAARQGAEARTLWGTLLVLALGTLLGSGIAIALVGALSRPLQRLQVYA 458
           D++++L  A  +   +QGA    + G  +VL L T +G  IA ++   ++R L+ L+   
Sbjct: 304 DLNQSLAEAGSVY--QQGAIKAVVIGIAVVL-LATAIGYHIAHSVREPVTRILKTLE--- 357

Query: 459 GDVAAGNLDARPEGQYPAELDAMRHSIESMVQNLRMRIHEADAKGMEAADSAQAAQAALD 518
             +  GN+  R E +Y  E   +   I S+  NL    H+   K   A+D          
Sbjct: 358 -SLTQGNMTQRIEIRYNNEFSRLSRHINSLADNL----HDILVKLNSASDD--------- 403

Query: 519 KARASETRIKGLMERMTGAAGKARSVSEHVSRSINDLTAQVHTITQGVETQRHRMDDTAQ 578
                          +T  A   ++ S      +N              +QR +    A 
Sbjct: 404 ---------------LTATASTNQTTSLSAQNKLN--------------SQREQTSSVAA 434

Query: 579 AMDTMRTMVSDVADNARRAAEQADLSRGHAQQGASGVGEAVASIGQVRERIERLNTAMAR 638
           AM  M   V +VA++A+ +          ++ G   +   +++I Q+  R+     A+  
Sbjct: 435 AMTEMAHSVQEVANSAQNSLAMVQQVETASESGRQIMSTNISTIRQLETRLIESVEAVGD 494

Query: 639 LGEEADSIGKVMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQA 698
           L + +  IG ++ VI +IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA++T Q+
Sbjct: 495 LRKMSSQIGSILDVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRVLAQRTTQS 554

Query: 699 TGEVGSAVTRIQTHTRDNIAAVETAMREATASADAATASGRVMDDIVSRVDETAGMVQSI 758
           T E+ S ++ +Q+ +      +E+ M++   S + A+ +   M++I + + E + M   I
Sbjct: 555 TSEIESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHI 614

Query: 759 AAASDQQAAAATMVGRNVEEVNAIAGDTAASMSHFAGT 796
           + A+ +Q    T + R++E++N I+ ++  +MS  A T
Sbjct: 615 SQAAGEQNETTTSIARSIEDINHISDESYQAMSQIAQT 652



 Score = 33.9 bits (76), Expect = 4e-05
 Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 21/122 (17%)

Query: 485 IESMVQNLRM------RIHEADAKGME-AADSAQAAQAALDKARASETRIKGLMERMTGA 537
           IESM+ NL+       ++ E+  + ME + + A  A +A+++ +A    I  +   ++ A
Sbjct: 558 IESMISNLQSSSSLASKVIESCMQDMELSVEQASHANSAMEEIQALIIEISHMSTHISQA 617

Query: 538 AGKARSVSEHVSRSINDLTAQVHTITQGVETQRHRMDDTAQAMDTMRTMVSDVADNARRA 597
           AG+    +  ++RSI D+               H  D++ QAM  +    +++   A + 
Sbjct: 618 AGEQNETTTSIARSIEDI--------------NHISDESYQAMSQIAQTSANLTALANQQ 663

Query: 598 AE 599
           +E
Sbjct: 664 SE 665