Pairwise Alignments

Query, 963 a.a., methyl-accepting chemotaxis protein DcrH (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 530 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  196 bits (499), Expect = 3e-54
 Identities = 130/449 (28%), Positives = 220/449 (48%), Gaps = 20/449 (4%)

Query: 532 ERMTGAAGKA-RSVSEHVSRSINDLTAQVHTITQGVET--------------QRHRMDDT 576
           E + G   KA   + E VSR++  L+     + +  +T              Q+  +++ 
Sbjct: 85  EALGGPLFKAFNQIGEDVSRTVFSLSKSAQQLVRVADTVQADSQVSKTGALRQKDDVEEA 144

Query: 577 AQAMDTMRTMVSDVADNARRAAEQADLSRGHAQQGASGVGEAVASIGQVRERIERLNTAM 636
            Q +  +    ++V+      ++ A  S+  A +G   +     ++  V E+    +   
Sbjct: 145 KQIVSKLFETTAEVSSFCESTSQLASESKRQADRGKQEMRSLETALEDVGEQFAASDQNF 204

Query: 637 ARLGEEADSIGKVMSVISDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTM 696
            +L +E+  IG+V+  I  IA+QTNLLALNAAIE+ARAG+ GRGFAVVADEVR LA +T 
Sbjct: 205 EQLKQESLQIGQVVETIKGIAEQTNLLALNAAIESARAGELGRGFAVVADEVRSLALRTQ 264

Query: 697 QATGEVGSAVTRIQTHTRDNIAAVETAMREATASADAATASGRVMDDIVSRVDETAGMVQ 756
            AT ++ + +  +QT   D IAA++   +    S   A  +    +++VS++D    + Q
Sbjct: 265 VATEDINNKIVNLQTQINDAIAAMQKNRQSVLHSQSVANEAESHFEELVSQIDAIDALGQ 324

Query: 757 SIAAASDQQAAAATMVGRNVEEVNAIAGDTAASMSHFAGTLEDIFSQVQELFSMIEVIST 816
            IA AS  Q     M+   + EV+ ++ +   +          + +   E+ S++   +T
Sbjct: 325 EIAVASQHQVEQTQMLETCLVEVDKVSDENVKATQETLLASITVRNLAGEIDSLLHRFAT 384

Query: 817 GEEGVSVLADTGDADVLVKWSEDL-ANLPSIDTQHKRLVDYINDLYRAARRR-DMDKARE 874
             E +    +    D L++WS+ L  NL  I+ QHK LV  IN+LY        +   + 
Sbjct: 385 DSEQIG--REDTRRDKLIEWSDALDLNLAEINRQHKTLVHLINELYYLLNNNYGLASIKR 442

Query: 875 VFDALKNYAVEHFGYEERLFADYAYPEATRHKEIHRRFVETVLKWEKQLAAGDPEVVMTT 934
           V   L +Y   HF YEE LF  + YP+  +H + H + V  VL +++++  G+ ++    
Sbjct: 443 VVQGLIDYTANHFKYEETLFEQFGYPQDKQHTDSHHQLVGKVLAFQRRVEQGE-DIGDEL 501

Query: 935 LRGLVDWLVNHIMKEDKKYEAYLRERGVS 963
           +  L  WL  HI KEDK Y    +  G++
Sbjct: 502 MAFLKSWLSQHIQKEDKAYVDCFKHNGMN 530