Pairwise Alignments

Query, 542 a.a., cytochrome c family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 468 a.a., cytochrome c, putative (RefSeq) from Shewanella loihica PV-4

 Score =  409 bits (1050), Expect = e-118
 Identities = 212/464 (45%), Positives = 267/464 (57%), Gaps = 37/464 (7%)

Query: 39  ATGLVGKLPEHHITADHSKHPALQQPFASPQEVTKACLSCHNQAALQVHKTIHWTW-LDP 97
           A G+ G L   +  A++    A+Q PF    +VT+ C+ CH   A    K+ HWTW L+ 
Sbjct: 12  AAGVFG-LASLNAIAENPHKEAIQGPFTQGSQVTEQCIECHEDHAKDFMKSSHWTWELEQ 70

Query: 98  ADPTRKMGKGGIT-FNNFCIAVPSNEPRCTSCHAGYGWKDKNFDFSAQENVDCLVCHDRT 156
             P R + +G     NNFC ++  NEPRCTSCHAGYGWKD NFDFS    VDCLVCHD T
Sbjct: 71  KLPGRTVKRGKKNAINNFCTSIAGNEPRCTSCHAGYGWKDNNFDFSDMTKVDCLVCHDTT 130

Query: 157 GTYKKFPTMAGMPVSEPTKFGEEQFDPPDYNAVAAAVGRPTRDNCGNCHFYGGGGDAVKH 216
           GTY K P  AG           E     +   VA  VG P RDNCG+CHFYGGGGDAVKH
Sbjct: 131 GTYVKDPAGAG-----------EALAKVNLERVAQNVGMPVRDNCGSCHFYGGGGDAVKH 179

Query: 217 GDLDSSLHTPKREIDVHMDVKGANFTCQRCHTTDVHFIAGRTYKEPAFTERKSLVQDDQV 276
           GDLDSS+  P +  DVHMD  G +F CQ CHTT  H I G              V     
Sbjct: 180 GDLDSSMAYPDKATDVHMDSDGNDFQCQTCHTTQQHQITGNAMG----------VSPGGE 229

Query: 277 KRIACESCHTATPHKAGHKANDHTDKVACQTCHIPAYARAIPTKMWWDWSTAGKKKDGKN 336
             I CE+CH + PH A  + N HT  VACQTCHIP +AR  PTKM WDWSTAG  ++   
Sbjct: 230 NDIGCENCHDSAPH-ANKRLNTHTASVACQTCHIPFFARNEPTKMSWDWSTAGSDQE--- 285

Query: 337 YKEKGPLGKPVYDTQKGDFRWEQNVVPEYKWYGGRMDYLLLTDKVDPAKPVEINRVIGSP 396
            +     GK  +  +KG F W + V PEY WY G+ D  ++ DK+DP+K  ++   +G  
Sbjct: 286 -ETVDEYGKHTFMKKKGSFVWGKMVKPEYAWYNGKADAYMVGDKMDPSKVTKLTAPLGDI 344

Query: 397 DDPNARIMPFKVHRGKQPFDPELKTFVVPHLFGKDDAAYWKTYDWAKAIEAGQKA----- 451
            D  A+I PFKVHRGKQ +D +   FV   ++GK    YWK +DW KA + G +A     
Sbjct: 345 TDKTAKIYPFKVHRGKQIYDKKQNIFVTAKVYGK--GGYWKEFDWDKAAKLGMEANQALA 402

Query: 452 -VGLPWSGKYTFVETAYHYPITHMVAPKEKALQCADCHSPAGRL 494
             G+ +SG++ F ET   + I HMV+PK++AL+C DCH+   RL
Sbjct: 403 QQGIKYSGEHGFAETEMWWRINHMVSPKDQALKCNDCHNKGTRL 446