Pairwise Alignments

Query, 231 a.a., HD domain protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 474 a.a., putative PAS/PAC sensor protein (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  138 bits (347), Expect = 2e-37
 Identities = 80/182 (43%), Positives = 106/182 (58%), Gaps = 14/182 (7%)

Query: 11  LHELSESLGRAIDAKDPCTSTHSEEVATVSHALALALRLTPGDADIIHIAGHLHDIGKIG 70
           L +   +L  A + +DP T+ H   VA ++HA+A+ L L+    + + +AG LHDIGKI 
Sbjct: 288 LRQTVSALATASEKRDPYTAGHQARVAELAHAMAVRLGLSGERLEGLRVAGMLHDIGKIH 347

Query: 71  IPDAILFKPDRLSDEEWGVVRRHPGMGAEMLR------PVAALQLHGIPVMVGQHHERFD 124
           IP  IL KP RLSD E G++R H  +G ++L+      PVA + L        QHHER D
Sbjct: 348 IPAEILAKPTRLSDLEMGIMRTHSQVGYDILKEIEFPWPVAQIVL--------QHHERLD 399

Query: 125 GKGYPQGFSGRAIHPGARIIAVADGLSAMMQRRSYRAAWTFDEALEEVVRCRGTQYDPEV 184
           G GYP   SG  + P ARI+AVAD + AM   R YRA+     AL E+   RGT+YD  V
Sbjct: 400 GTGYPNALSGDDVLPEARILAVADVVEAMSSHRPYRASLGLGPALAEIAAGRGTRYDRNV 459

Query: 185 VD 186
           VD
Sbjct: 460 VD 461