Pairwise Alignments

Query, 375 a.a., carbamoyl-phosphate synthase, small subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 391 a.a., Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) from Xanthomonas campestris pv. campestris strain 8004

 Score =  319 bits (817), Expect = 9e-92
 Identities = 174/372 (46%), Positives = 229/372 (61%), Gaps = 5/372 (1%)

Query: 3   ALLALEDGFVLEGRSFTGPGETGGEAIFNTGMTGYQEVLTDPSYAGQMVCMTYPLVGNYG 62
           A+L LEDG V EG S    G + GE +FNT MTGYQEVLTDPSYA QMV +TYP +GN G
Sbjct: 21  AILVLEDGTVFEGESVGANGLSVGEVVFNTAMTGYQEVLTDPSYARQMVTLTYPHIGNTG 80

Query: 63  VTREDMESGKVHVEAFIVKECCKVPSNWRSEISLPDYLKRHGVMGIEGIDTRALTRHLRI 122
              +D E+ +V     IV++  + PS+WR++++LP +L+  GV+ I GIDTR LTR LR 
Sbjct: 81  FNDQDDEAKQVWAAGLIVRDVPRRPSSWRNQVALPAWLQTRGVVAISGIDTRKLTRLLRE 140

Query: 123 HGAMRGVISTQETDPARLVERARALPSMEGQNLVTRVAPAAPYRWDGERPQAVTLEPGGC 182
            GA  G +   E D  + +E AR  P ++G +L   V+    Y+W   +   + L     
Sbjct: 141 KGAQNGALMAGEIDVEKALEAARKFPGLKGMDLAKVVSTETTYQW---QEGQLDLNANAF 197

Query: 183 AWVGKGPRLVVYDFGIKWNILRLLAQQGFDMLVVPPSFKAADVAAVGAQAVFLSNGPGDP 242
                  ++V YD+G+K NILR+LA++G D+ VVP     A+V A+    VFLSNGPGDP
Sbjct: 198 VQAELKFKVVAYDYGVKINILRMLAERGCDVTVVPARTPVAEVLAMQPDGVFLSNGPGDP 257

Query: 243 ATLKDEIAEIAKL-AQTYPTAGICLGHQLLGHALGGRTMKLKFGHHGCNHPVKDLTTGRI 301
                 I+ I +L A+  PT GICLGHQLL  A G +T+K+  GHHG NHPV+DL  GR+
Sbjct: 258 EPCDYAISAIQELIAKKVPTFGICLGHQLLALAAGAKTVKMATGHHGANHPVQDLDGGRV 317

Query: 302 EISSQNHGFCVDIDSL-TDVEITHVNLNDGTLEGFAHKTKPVIAVQHHPEASPGPNDSRY 360
            I+SQNHGF VD  +L  +V +TH +L DGT +G A    P  + Q HPEASPGP D   
Sbjct: 318 MITSQNHGFAVDETTLPANVRVTHRSLFDGTNQGIALTDAPAFSFQGHPEASPGPRDVGP 377

Query: 361 FFARFRNMVREA 372
            F RF   + EA
Sbjct: 378 LFDRFVASMAEA 389