Pairwise Alignments

Query, 375 a.a., carbamoyl-phosphate synthase, small subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

Subject, 387 a.a., carbamoyl-phosphate synthase small chain from Phaeobacter inhibens DSM 17395

 Score =  298 bits (762), Expect = 2e-85
 Identities = 176/373 (47%), Positives = 219/373 (58%), Gaps = 16/373 (4%)

Query: 3   ALLALEDGFVLEGRSFTGPGETGGEAIFNTGMTGYQEVLTDPSYAGQMVCMTYPLVGNYG 62
           A LAL DG +  G  F   GET  E  FNT MTGYQE++TDPSYAGQ+V  T+P +GN G
Sbjct: 11  ACLALADGTIFYGNGFGAYGETVAELCFNTAMTGYQEIMTDPSYAGQIVTFTFPHIGNTG 70

Query: 63  VTREDMESGKVHVEAFIVKECCKVPSNWRSEISLPDYLKRHGVMGIEGIDTRALTRHLRI 122
           VT ED E+        +VK    + SNWR+   L D+L R   + I GIDTR LTR +R 
Sbjct: 71  VTPEDDETADPVAAGMVVKWDPTLASNWRATEELKDWLTRTNRIAIGGIDTRRLTRAIRQ 130

Query: 123 HGAMRGVISTQ---ETDPARLVERARALPSMEGQNLVTRVAPAAPYRWDGER---PQAVT 176
            GA    ++       D   LV +AR    +EG +L   V  +  YRWD  R   P+  T
Sbjct: 131 LGAPHVALAHDPDGNFDIEALVAKAREWSGLEGLDLAKDVTCSQSYRWDEMRWAWPEGYT 190

Query: 177 LEPGGCAWVGKGPRLVVYDFGIKWNILRLLAQQGFDMLVVPPSFKAADVAAVGAQAVFLS 236
            +           ++V  D+G K NILR LA  G D+ V+P S  A +V A     VFLS
Sbjct: 191 RQE------APKHKVVAIDYGAKRNILRCLASAGCDVTVLPASATAEEVLAHSPDGVFLS 244

Query: 237 NGPGDP-ATLKDEIAEIAKLAQT--YPTAGICLGHQLLGHALGGRTMKLKFGHHGCNHPV 293
           NGPGDP AT +  +  I ++  T   P  GICLGHQ+L  ALGG+T+K+  GHHG NHPV
Sbjct: 245 NGPGDPAATGEYAVPMIQQILDTTDLPMFGICLGHQMLALALGGKTVKMNHGHHGANHPV 304

Query: 294 KDLTTGRIEISSQNHGFCVDIDSLTD-VEITHVNLNDGTLEGFAHKTKPVIAVQHHPEAS 352
           K+  TG++EI+S NHGF VD  SL D VE THV+L DG+  G     +PV +VQHHPEAS
Sbjct: 305 KENATGKVEITSMNHGFAVDGQSLPDGVEETHVSLFDGSNCGIRISDRPVYSVQHHPEAS 364

Query: 353 PGPNDSRYFFARF 365
           PGP DS Y F RF
Sbjct: 365 PGPQDSFYLFERF 377